myRT

myRT report for GCA_002165385.1_ASM216538v1

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Seq: NHRP01000030.1 Acinetobacter sp. WCHA39 NODE_30_length_34548_cov_107.342, whole genome shotgun sequence (34548 bp)
Overview 1 RT 1: 28011-32966 bp Neighborhood of RT #1 [28011, 33235] RVT-Retrons Trypsin_2 DDE_Tnp_1 BLUF Feature: gene Location: 28011-28517 bp Feature: gene Location: 28672-29529 bp Feature: gene Location: 29714-31330 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29846-30431 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29846-30431 bp Feature: domain Description: Trypsin_2 Location: 30788-31202 bp Feature: domain Description: Trypsin_2 Location: 30788-31 202 bp Feature: gene Location: 31616-32368 bp Feature: domain Description: DDE_Tnp_1 Location: 31781-32324 bp Feature: domain Description: DDE_Tnp_1 Location: 31 781 -32324 bp Feature: gene Location: 32660-33235 bp Feature: domain Description: BLUF Location: 32675-32966 bp Feature: domain Description: BLUF Location: 32675-32966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), DDE_Tnp_1 (pfam01609), BLUF (smart01034)

Seq: NHRP01000034.1 Acinetobacter sp. WCHA39 NODE_34_length_30643_cov_131.408, whole genome shotgun sequence (30643 bp)
Overview 1 RT 1: 25013-29824 bp Neighborhood of RT #1 [25013, 30093] Kup PRK09692 RVT-UG2 Feature: gene Location: 25013-26890 bp Feature: domain Description: Kup Location: 25022-26888 bp Feature: domain Description: Kup Location: 2 502 2 -2 6888 bp Feature: gene Location: 27286-28449 bp Feature: domain Description: PRK09692 Location: 27292-28435 bp Feature: domain Description: PRK09692 Location: 2 72 92 -2 8435 bp Feature: gene Location: 28690-30093 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 28927-29824 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 892 7-2 982 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Kup (COG3158), PRK09692 (Integrase; provisional), RVT-UG2

Seq: NHRP01000005.1 Acinetobacter sp. WCHA39 NODE_5_length_130880_cov_116.994, whole genome shotgun sequence (130880 bp)
Overview 1 RT 1: 122942-130744 bp Neighborhood of RT #1 [122942, 130744] PRK10039 PRK07209 RVT-UG5 RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like YwgA Feature: gene Location: 122942-123406 bp Feature: domain Description: PRK10039 Location: 122987-123275 bp Feature: domain Description: PRK1003 9 Location: 122987-123 275 bp Feature: gene Location: 123448-124731 bp Feature: domain Description: PRK07209 Location: 123460-124729 bp Feature: domain Description: PRK07209 Location: 123 460-124729 bp Feature: gene Location: 124856-128098 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 125387-125876 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1253 87-125876 bp Feature: gene Location: 128114-130540 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 128495-128978 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 128495-128978 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 129359-129845 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 1293 59-129845 bp Feature: domain Description: YwgA Location: 130004-130175 bp Feature: domain Description: YwgA Location: 13 0004-13 0175 bp Feature: gene Location: 130547-130744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10039 (hypothetical protein; Provisional), PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), RVT-UG5, RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), YwgA (COG3465)