myRT

myRT report for GCA_002165575.1_ASM216557v1

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Seq: MXQF01000009.1 Pseudoalteromonas sp. A601 contig9, whole genome shotgun sequence (200572 bp)
Overview 1 RT 1: 128694-136712 bp Neighborhood of RT #1 [128694, 136712] YafY HATPase_c_3 RVT-UG1 Feature: gene Location: 128694-129578 bp Ori: OUS72072.1 Feature: domain Description: YafY Location: 129045-129348 bp Feature: domain Description: YafY Location: 1 29045-1 29348 bp Feature: gene Location: 129594-131531 bp Ori: OUS72073.1 Feature: domain Description: HATPase_c_3 Location: 129666-130008 bp Feature: domain Description: HATPase_c_3 Location: 1 29666-1 30008 bp Feature: gene Location: 131572-135387 bp Ori: OUS72074.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 132277-132769 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 32277-1 32769 bp Feature: gene Location: 135539-135901 bp Feature: gene Location: 135945-136712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafY (COG2378), HATPase_c_3 (pfam13589), RVT-UG1

Seq: MXQF01000001.1 Pseudoalteromonas sp. A601 contig1, whole genome shotgun sequence (318188 bp)
Overview 1 RT 1: 10513-15677 bp Neighborhood of RT #1 [10513, 16030] HTH_XRE RVT-Retrons TniB rve Mu-transpos_C Feature: gene Location: 10513-10812 bp Ori: OUS74440.1 Feature: domain Description: HTH_XRE Location: 10534-10714 bp Feature: domain Description: HTH_XRE Location: 10534-10714 bp Feature: gene Location: 10902-11678 bp Feature: gene Location: 11665-12849 bp Ori: OUS74442.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11809-12382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11809-12 382 bp Feature: gene Location: 13203-14204 bp Ori: OUS74443.1 Feature: domain Description: TniB Location: 13248-13776 bp Feature: domain Description: TniB Location: 132 48-13776 bp Feature: gene Location: 14207-16030 bp Ori: OUS74444.1 Feature: domain Description: rve Location: 14819-15236 bp Feature: domain Description: rve Location: 14819-152 36 bp Feature: domain Description: Mu-transpos_C Location: 15497-15677 bp Feature: domain Description: Mu-transpos_C Location: 15497-15677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, TniB (pfam05621), rve (pfam00665), Mu-transpos_C (pfam09299)