myRT

myRT report for GCA_002166415.1_ASM216641v1

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Seq: NIEO01000170.1 Escherichia coli strain 35.1a 7000000213725749, whole genome shotgun sequence (54329 bp)
Overview 1 RT 1: 53306-54170 bp Neighborhood of RT #1 [53306, 54328] PRK10173 PRK10173 RVT-GII Feature: gene Location: 53306-53755 bp Feature: domain Description: PRK10173 Location: 53309-53747 bp Feature: domain Description: PRK1 01 73 Location: 53309-53747 bp Feature: gene Location: 53739-54050 bp Feature: domain Description: PRK10173 Location: 53742-53961 bp Feature: domain Description: PRK1 01 73 Location: 53742-53961 bp Feature: gene Location: 54089-54328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54098-54170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54098-541 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: NIEO01000145.1 Escherichia coli strain 35.1a 7000000213725760, whole genome shotgun sequence (1329 bp)
Overview 1 RT 1: 3-1263 bp Neighborhood of RT #1 [3, 1328] RVT-GII PHA02517 Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76-330 bp Feature: gene Location: 921-1328 bp Feature: domain Description: PHA02517 Location: 924-1263 bp Feature: domain Description: PHA02 517 Location: 92 4-12 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: NIEO01000104.1 Escherichia coli strain 35.1a 7000000213725780, whole genome shotgun sequence (3593 bp)
Overview 1 RT 1: 1427-3347 bp Neighborhood of RT #1 [1427, 3592] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1427-1831 bp Feature: domain Description: InsE Location: 1457-1793 bp Feature: domain Description: InsE Location: 1457-1793 bp Feature: gene Location: 1860-2216 bp Feature: domain Description: PHA02517 Location: 1863-2172 bp Feature: domain Description: PHA02517 Location: 1863 -2172 bp Feature: gene Location: 2333-3592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2342-3074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 42-3 074 bp Feature: domain Description: GIIM Note: maturase Location: 3149-3347 bp Feature: domain Description: GIIM Note: maturase Location: 3 149-3 3 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NIEO01000080.1 Escherichia coli strain 35.1a 7000000213725797, whole genome shotgun sequence (46058 bp)
Overview 1 RT 1: 43188-45368 bp Neighborhood of RT #1 [43188, 46021] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 43188-43478 bp Feature: gene Location: 43488-44549 bp Feature: domain Description: HTH_29 Location: 43608-43779 bp Feature: domain Description: HTH_29 Location: 4 3608-4 3779 bp Feature: domain Description: HTH_33 Location: 43812-43974 bp Feature: domain Description: HTH_33 Location: 4 3812-4 3974 bp Feature: domain Description: DDE_3 Location: 44016-44445 bp Feature: domain Description: DDE_3 Location: 4 4 016-4 4 4 4 5 bp Feature: gene Location: 44651-46021 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44912-45368 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4 4 912-4 5368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2