myRT

myRT report for GCA_002166455.1_ASM216645v1

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Seq: NIEP01000138.1 Escherichia coli strain 35.2p 7000000213725912, whole genome shotgun sequence (1329 bp)
Overview 1 RT 1: 2-1328 bp Neighborhood of RT #1 [2, 1327] PHA02517 RVT-GII Feature: gene Location: 2-409 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: domain Description: PHA0251 7 Location: 5-344 bp Feature: gene Location: 1001-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 274-1 328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: NIEP01000065.1 Escherichia coli strain 35.2p 7000000213725971, whole genome shotgun sequence (3593 bp)
Overview 1 RT 1: 1427-3347 bp Neighborhood of RT #1 [1427, 3592] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1427-1831 bp Feature: domain Description: InsE Location: 1457-1793 bp Feature: domain Description: InsE Location: 1457-1793 bp Feature: gene Location: 1860-2216 bp Feature: domain Description: PHA02517 Location: 1863-2172 bp Feature: domain Description: PHA02 517 Location: 1863-2 172 bp Feature: gene Location: 2333-3592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2342-3074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 342 -3074 bp Feature: domain Description: GIIM Note: maturase Location: 3149-3347 bp Feature: domain Description: GIIM Note: maturase Location: 3149-3347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NIEP01000048.1 Escherichia coli strain 35.2p 7000000213725986, whole genome shotgun sequence (46058 bp)
Overview 1 RT 1: 43188-45368 bp Neighborhood of RT #1 [43188, 46021] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 43188-43478 bp Feature: gene Location: 43488-44549 bp Feature: domain Description: HTH_29 Location: 43608-43779 bp Feature: domain Description: HTH_29 Location: 43 608-43 779 bp Feature: domain Description: HTH_33 Location: 43812-43974 bp Feature: domain Description: HTH_3 3 Location: 43 812-43 974 bp Feature: domain Description: DDE_3 Location: 44016-44445 bp Feature: domain Description: DDE_3 Location: 44016-44445 bp Feature: gene Location: 44651-46021 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44912-45368 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44912-453 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2

Seq: NIEP01000105.1 Escherichia coli strain 35.2p 7000000213726032, whole genome shotgun sequence (12547 bp)
Overview 1 RT 1: 2-1016 bp Neighborhood of RT #1 [2, 1024] RVT-GII PRK10173 PRK10173 Feature: gene Location: 2-241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-83 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-83 bp Feature: gene Location: 280-591 bp Feature: domain Description: PRK10173 Location: 283-502 bp Feature: domain Description: PRK10173 Location: 283-502 bp Feature: gene Location: 575-1024 bp Feature: domain Description: PRK10173 Location: 578-1016 bp Feature: domain Description: PRK10173 Location: 578-1016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)