myRT

myRT report for GCA_002173955.1_ASM217395v1

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Seq: MOSN01000319.1 Klebsiella pneumoniae strain 1456 2469, whole genome shotgun sequence (12123 bp)
Overview 1 RT 1: 8318-10920 bp Neighborhood of RT #1 [8318, 11456] HTH_28 SLATT_5 RVT-UG17 Feature: gene Location: 8318-8851 bp Ori: OUY54163.1 Feature: domain Description: HTH_28 Location: 8345-8393 bp Feature: domain Description: HTH_28 Location: 8345-8393 bp Feature: gene Location: 9557-10096 bp Ori: OUY54164.1 Feature: domain Description: SLATT_5 Location: 9563-10079 bp Feature: domain Description: SLATT_5 Location: 9563-1 0079 bp Feature: gene Location: 10086-11456 bp Ori: OUY54165.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 10314-10920 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 031 4-1 0920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), SLATT_5 (pfam18160), RVT-UG17

Seq: MOSN01000345.1 Klebsiella pneumoniae strain 1456 2521, whole genome shotgun sequence (14609 bp)
Overview 1 RT 1: 5018-14410 bp Neighborhood of RT #1 [5018, 14418] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr YjgH_like Feature: gene Location: 5018-6037 bp Ori: OUY52563.1 Feature: domain Description: DUF4917 Location: 5078-6002 bp Feature: domain Description: DUF4917 Location: 5078-6002 bp Feature: gene Location: 7436-9682 bp Ori: OUY52564.1 Feature: domain Description: AAA_15 Location: 7439-8447 bp Feature: domain Description: AAA_15 Location: 7439-8447 bp Feature: gene Location: 9797-10897 bp Ori: OUY52565.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9977-10511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9977-10511 bp Feature: gene Location: 11553-12422 bp Ori: OUY52566.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 12075-12246 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 12 075-12 2 46 bp Feature: gene Location: 14029-14418 bp Ori: OUY52567.1 Feature: domain Description: YjgH_like Location: 14089-14410 bp Feature: domain Description: YjgH_like Location: 14089-14410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), YjgH_like (cd02198)

Seq: MOSN01000470.1 Klebsiella pneumoniae strain 1456 2771, whole genome shotgun sequence (62868 bp)
Overview 1 RT 1: 53846-58594 bp Neighborhood of RT #1 [53846, 58599] COG3499 D RVT-UG11 SmpB PRK10724 Feature: gene Location: 53846-54331 bp Ori: OUY47007.1 Feature: domain Description: COG3499 Location: 53849-54275 bp Feature: domain Description: COG3 499 Location: 53 849-54275 bp Feature: gene Location: 54328-55428 bp Ori: OUY47008.1 Feature: domain Description: D Location: 54343-55414 bp Feature: domain Description: D Location: 543 43 -55414 bp Feature: gene Location: 56141-56914 bp Ori: OUY47009.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 56276-56729 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 56276-56729 bp Feature: gene Location: 57530-58012 bp Ori: OUY47010.1 Feature: domain Description: SmpB Location: 57560-58004 bp Feature: domain Description: SmpB Location: 57560-58004 bp Feature: gene Location: 58162-58599 bp Ori: OUY47011.1 Feature: domain Description: PRK10724 Location: 58165-58594 bp Feature: domain Description: PRK10724 Location: 58165-58594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3499 (Phage protein U ), D (PHA02561), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)