myRT

myRT report for GCA_002174005.1_ASM217400v1

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Seq: MOSQ01000407.1 Klebsiella pneumoniae strain H11 contig_21_3, whole genome shotgun sequence (9120 bp)
Overview 1 RT 1: 1-4518 bp Neighborhood of RT #1 [1, 4535] RVT-UG4 FimD FimC Feature: gene Location: 1-1133 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 412-856 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 41 2-856 bp Feature: gene Location: 1130-3724 bp Ori: OUY74644.1 Feature: domain Description: FimD Location: 1172-3713 bp Feature: domain Description: FimD Location: 1 1 72-371 3 bp Feature: gene Location: 3771-4535 bp Ori: OUY74645.1 Feature: domain Description: FimC Location: 3816-4518 bp Feature: domain Description: FimC Location: 381 6-451 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: MOSQ01000425.1 Klebsiella pneumoniae strain H11 contig_22_2, whole genome shotgun sequence (6733 bp)
Overview 1 RT 1: 3875-6729 bp Neighborhood of RT #1 [3875, 6733] umuC PRK10276 RVT-GII Feature: gene Location: 3875-5146 bp Ori: OUY74453.1 Feature: domain Description: umuC Location: 3878-5141 bp Feature: domain Description: umuC Location: 3878-5141 bp Feature: gene Location: 5146-5571 bp Ori: OUY74454.1 Feature: domain Description: PRK10276 Location: 5149-5557 bp Feature: domain Description: PRK102 76 Location: 5149-5557 bp Feature: gene Location: 5976-6733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6378-6729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6378-672 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII