myRT

myRT report for GCA_002174995.1_ASM217499v1

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Seq: MTHP01000291.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_291, whole genome shotgun sequence (1325 bp)
Overview 1 RT 1: 60-339 bp Neighborhood of RT #1 [60, 818] RVT-UG9 Feature: gene Location: 60-818 bp Ori: OSR64309.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 63-339 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 63-339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9

Seq: MTHP01000236.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_236, whole genome shotgun sequence (2847 bp)
Overview 1 RT 1: 305-2500 bp Neighborhood of RT #1 [305, 2817] ComA-like_MBL-fold RVT-Retrons Feature: gene Location: 305-1306 bp Ori: OSR64522.1 Feature: domain Description: ComA-like_MBL-fold Location: 437-923 bp Feature: domain Description: ComA-like_MBL-fold Location: 437-92 3 bp Feature: gene Location: 1750-2817 bp Ori: OSR64523.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1903-2500 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1903-2 500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComA-like_MBL-fold (cd07731), RVT-Retrons

Seq: MTHP01000344.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_344, whole genome shotgun sequence (846 bp)
Overview 1 RT 1: 69-624 bp Neighborhood of RT #1 [69, 758] RVT-GII GIIM Feature: gene Location: 69-758 bp Ori: OSR62158.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78-339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78-3 3 9 bp Feature: domain Description: GIIM Note: maturase Location: 396-624 bp Feature: domain Description: GIIM Note: maturase Location: 3 96-624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MTHP01000270.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_270, whole genome shotgun sequence (1871 bp)
Overview 1 RT 1: 504-1614 bp Neighborhood of RT #1 [504, 1787] RVT-GII GIIM Feature: gene Location: 504-1787 bp Ori: OSR64361.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 4 -1359 bp Feature: domain Description: GIIM Note: maturase Location: 1404-1614 bp Feature: domain Description: GIIM Note: maturase Location: 14 04 -1614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MTHP01000310.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_310, whole genome shotgun sequence (1113 bp)
Overview 1 RT 1: 361-631 bp Neighborhood of RT #1 [361, 1011] RVT-GII Feature: gene Location: 361-1011 bp Ori: OSR63331.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MTHP01000175.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_175, whole genome shotgun sequence (8319 bp)
Overview 1 RT 1: 60-4701 bp Neighborhood of RT #1 [60, 4709] RVT-GII Intron_maturas2 Top1 modC_ABC Feature: gene Location: 60-1646 bp Ori: OSR65147.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-1134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-1134 bp Feature: domain Description: Intron_maturas2 Location: 1230-1548 bp Feature: domain Description: Intron_maturas2 Location: 1230-1548 bp Feature: gene Location: 2477-3532 bp Ori: OSR65148.1 Feature: domain Description: Top1 Location: 2510-3524 bp Feature: domain Description: Top1 Location: 2510-3524 bp Feature: gene Location: 3621-4709 bp Ori: OSR65149.1 Gene: cysA_2 Feature: domain Description: modC_ABC Location: 3636-4701 bp Feature: domain Description: modC_ABC Location: 36 36 -4701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Top1 (COG3569), modC_ABC (TIGR02142)

Seq: MTHP01000299.1 Pseudomonas syringae pv. actinidiae strain C16 BV326_299, whole genome shotgun sequence (1196 bp)
Overview 1 RT 1: 4-1009 bp Neighborhood of RT #1 [4, 1116] RVT-GII GIIM Feature: gene Location: 4-1116 bp Ori: OSR63936.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52-709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52-7 09 bp Feature: domain Description: GIIM Note: maturase Location: 787-1009 bp Feature: domain Description: GIIM Note: maturase Location: 7 87 -1009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)