myRT

myRT report for GCA_002176895.1_ASM217689v1

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Seq: NHZR01000007.1 Clostridium diolis strain NJP7 scaffold7, whole genome shotgun sequence (327632 bp)
Overview 1 RT 1: 108-5490 bp Neighborhood of RT #1 [108, 5540] RVT-GII HNHc PRK01100 YesM Feature: gene Location: 108-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 065 bp Feature: domain Description: HNHc Note: nucleases Location: 1617-1752 bp Feature: domain Description: HNHc Note: nucleases Location: 1 61 7-1 752 bp Feature: gene Location: 3306-3941 bp Feature: domain Description: PRK01100 Location: 3318-3933 bp Feature: domain Description: PRK01 1 00 Location: 331 8-3933 bp Feature: gene Location: 4227-5540 bp Feature: domain Description: YesM Location: 4479-5490 bp Feature: domain Description: YesM Location: 4479-5490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK01100 (accessory gene regulator ArgB-like protein), YesM (COG2972)

Seq: NHZR01000016.1 Clostridium diolis strain NJP7 scaffold16, whole genome shotgun sequence (109941 bp)
Overview 1 RT 1: 105578-109778 bp Neighborhood of RT #1 [105578, 109783] moaA PRK14499 MogA_MoaB RVT-GII WrbA OmpR Feature: gene Location: 105578-106546 bp Feature: domain Description: moaA Location: 105581-106544 bp Feature: domain Description: moaA Location: 105581-106544 bp Feature: gene Location: 106550-107485 bp Feature: domain Description: PRK14499 Location: 106556-106973 bp Feature: domain Description: PRK14499 Location: 106556-106973 bp Feature: domain Description: MogA_MoaB Location: 107003-107450 bp Feature: domain Description: MogA_MoaB Location: 107003-107450 bp Feature: gene Location: 108029-108733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108215-108683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1082 15-108683 bp Feature: gene Location: 108697-108915 bp Feature: domain Description: WrbA Location: 108706-108886 bp Feature: domain Description: WrbA Location: 108706-108886 bp Feature: gene Location: 109103-109783 bp Feature: domain Description: OmpR Location: 109115-109778 bp Feature: domain Description: OmpR Location: 109115-109778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT moaA (TIGR02666), PRK14499 (cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein), MogA_MoaB (cd00886), RVT-GII, WrbA (COG0655), OmpR (COG0745)

Seq: NHZR01000012.1 Clostridium diolis strain NJP7 scaffold12, whole genome shotgun sequence (144652 bp)
Overview 1 RT 1: 24133-31635 bp Neighborhood of RT #1 [24133, 31640] UvrA UvrA UvrA HTH_MARR RVT-GII OmpR BaeS Feature: gene Location: 24133-26382 bp Feature: domain Description: UvrA Location: 24139-24499 bp Feature: domain Description: UvrA Location: 2413 9-24499 bp Feature: domain Description: UvrA Location: 24514-25621 bp Feature: domain Description: UvrA Location: 24514-25621 bp Feature: domain Description: UvrA Location: 25627-26377 bp Feature: domain Description: UvrA Location: 25627-263 77 bp Feature: gene Location: 26384-26821 bp Feature: domain Description: HTH_MARR Location: 26471-26762 bp Feature: domain Description: HTH_MARR Location: 26471-26762 bp Feature: gene Location: 27676-29092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28033-28339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2803 3 -283 3 9 bp Feature: gene Location: 29891-30583 bp Feature: domain Description: OmpR Location: 29900-30575 bp Feature: domain Description: OmpR Location: 29900-3 0575 bp Feature: gene Location: 30588-31640 bp Feature: domain Description: BaeS Location: 30726-31635 bp Feature: domain Description: BaeS Location: 3 0726-3 163 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), HTH_MARR (smart00347), RVT-GII, OmpR (COG0745), BaeS (COG0642)

Seq: NHZR01000005.1 Clostridium diolis strain NJP7 scaffold5, whole genome shotgun sequence (711689 bp)
Overview 1 RT 1: 602163-608886 bp Neighborhood of RT #1 [602163, 608897] Peptidase_M19 MPP_YbbF-LpxH RVT-GII asnASE_II GlnQ Feature: gene Location: 602163-603098 bp Feature: domain Description: Peptidase_M19 Location: 602169-603087 bp Feature: domain Description: Peptidase_M19 Location: 602169-603087 bp Feature: gene Location: 603130-604062 bp Feature: domain Description: MPP_YbbF-LpxH Location: 603223-603895 bp Feature: domain Description: MPP_YbbF-LpxH Location: 603223-603895 bp Feature: gene Location: 604713-605627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604968-605580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604 968-605580 bp Feature: gene Location: 606902-607912 bp Feature: domain Description: asnASE_II Location: 606923-607910 bp Feature: domain Description: asnASE_II Location: 606923-607910 bp Feature: gene Location: 608169-608897 bp Feature: domain Description: GlnQ Location: 608175-608886 bp Feature: domain Description: GlnQ Location: 608175-608886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M19 (pfam01244), MPP_YbbF-LpxH (cd07398), RVT-GII, asnASE_II (TIGR00520), GlnQ (COG1126)