myRT

myRT report for GCA_002180645.1_ASM218064v1

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Seq: NDBQ01000052.1 Klebsiella pneumoniae strain 39879 39879_NODE_2.ctg_1, whole genome shotgun sequence (377685 bp)
Overview 1 RT 1: 335449-339446 bp Neighborhood of RT #1 [335449, 339596] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 335449-336422 bp Feature: domain Description: PRK09692 Location: 335458-335821 bp Feature: domain Description: PRK09692 Location: 335458-335821 bp Feature: domain Description: PRK09692 Location: 335842-336214 bp Feature: domain Description: PRK09692 Location: 335842-33621 4 bp Feature: gene Location: 336475-337116 bp Ori: OVF82007.1 Feature: domain Description: SLATT_5 Location: 336478-337081 bp Feature: domain Description: SLATT_5 Location: 336478-337081 bp Feature: gene Location: 337311-338720 bp Ori: OVF82008.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 337548-338160 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 337548-3381 60 bp Feature: gene Location: 338902-339037 bp Feature: gene Location: 339047-339596 bp Feature: domain Description: Psu Location: 339065-339446 bp Feature: domain Description: Psu Location: 339065-339446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)

Seq: NDBQ01000063.1 Klebsiella pneumoniae strain 39879 39879_NODE_19.ctg_1, whole genome shotgun sequence (97030 bp)
Overview 1 RT 1: 27302-32614 bp Neighborhood of RT #1 [27302, 32778] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27302-28548 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: domain Description: PRK09692 Location: 2 7311-2 82 05 bp Feature: gene Location: 28550-29191 bp Feature: gene Location: 29617-30582 bp Ori: OVF80163.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 972 5-3032 2 bp Feature: gene Location: 30560-32152 bp Ori: OVF80164.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: gene Location: 32137-32778 bp Ori: OVF80165.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR02 646 Location: 32 2 39-32 614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)