myRT

myRT report for GCA_002181915.1_ASM218191v1

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Seq: NDDF01000043.1 Klebsiella pneumoniae strain 43419 43419_NODE_4.ctg_1, whole genome shotgun sequence (377526 bp)
Overview 1 RT 1: 38098-42037 bp Neighborhood of RT #1 [38098, 42245] Psu RVT-UG17 SLATT_5 PRK09692 PRK09692 Feature: gene Location: 38098-38647 bp Feature: domain Description: Psu Location: 38116-38497 bp Feature: domain Description: Psu Location: 381 1 6-38497 bp Feature: gene Location: 38657-38792 bp Feature: gene Location: 38974-40383 bp Ori: OVI26080.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39211-39823 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3921 1 -39823 bp Feature: gene Location: 40578-41219 bp Ori: OVI26377.1 Feature: domain Description: SLATT_5 Location: 40581-41184 bp Feature: domain Description: SLATT_5 Location: 40581 -41 1 84 bp Feature: gene Location: 41272-42245 bp Feature: domain Description: PRK09692 Location: 41281-41644 bp Feature: domain Description: PRK09692 Location: 41 281 -41 644 bp Feature: domain Description: PRK09692 Location: 41665-42037 bp Feature: domain Description: PRK09692 Location: 41 665-42037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)

Seq: NDDF01000032.1 Klebsiella pneumoniae strain 43419 43419_NODE_20.ctg_1, whole genome shotgun sequence (54953 bp)
Overview 1 RT 1: 51750-54904 bp Neighborhood of RT #1 [51750, 54939] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 51750-52456 bp Feature: domain Description: InsE Location: 51762-52026 bp Feature: domain Description: InsE Location: 51762 -52 02 6 bp Feature: gene Location: 52428-52799 bp Feature: gene Location: 53093-54616 bp Ori: OVI28505.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53366-54098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53366-54098 bp Feature: domain Description: GIIM Note: maturase Location: 54212-54371 bp Feature: domain Description: GIIM Note: maturase Location: 542 12 -54371 bp Feature: gene Location: 54727-54939 bp Ori: OVI28506.1 Feature: domain Description: PHA02517 Location: 54730-54904 bp Feature: domain Description: PHA02 517 Location: 54730-54904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NDDF01000017.1 Klebsiella pneumoniae strain 43419 43419_NODE_16.ctg_1, whole genome shotgun sequence (97030 bp)
Overview 1 RT 1: 27302-32614 bp Neighborhood of RT #1 [27302, 32778] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27302-28548 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: domain Description: PRK09692 Location: 273 11-28205 bp Feature: gene Location: 28550-29191 bp Feature: gene Location: 29617-30582 bp Ori: OVI32585.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-3 03 22 bp Feature: gene Location: 30560-32152 bp Ori: OVI32586.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG3 950 Location: 3 0740-3 1961 bp Feature: gene Location: 32137-32778 bp Ori: OVI32587.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR02646 Location: 3 223 9-3 2614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)