myRT

myRT report for GCA_002181945.1_ASM218194v1

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Seq: NDDN01000025.1 Klebsiella pneumoniae strain 44812 44812_NODE_4.ctg_1, whole genome shotgun sequence (376942 bp)
Overview 1 RT 1: 335034-339031 bp Neighborhood of RT #1 [335034, 339181] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 335034-336007 bp Feature: domain Description: PRK09692 Location: 335043-335406 bp Feature: domain Description: PRK09692 Location: 335043-335406 bp Feature: domain Description: PRK09692 Location: 335427-335799 bp Feature: domain Description: PRK09692 Location: 335427-335799 bp Feature: gene Location: 336060-336701 bp Ori: OVI42500.1 Feature: domain Description: SLATT_5 Location: 336063-336666 bp Feature: domain Description: SLATT_5 Location: 336063-336666 bp Feature: gene Location: 336896-338305 bp Ori: OVI42449.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 337133-337745 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3371 33-337745 bp Feature: gene Location: 338487-338622 bp Feature: gene Location: 338632-339181 bp Feature: domain Description: Psu Location: 338650-339031 bp Feature: domain Description: Psu Location: 338650-339031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)

Seq: NDDN01000006.1 Klebsiella pneumoniae strain 44812 44812_NODE_19.ctg_1, whole genome shotgun sequence (60913 bp)
Overview 1 RT 1: 23304-26790 bp Neighborhood of RT #1 [23304, 26790] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 23304-24010 bp Feature: domain Description: InsE Location: 23316-23580 bp Feature: domain Description: InsE Location: 2 3316-2 3580 bp Feature: gene Location: 23982-24353 bp Feature: gene Location: 24647-26170 bp Ori: OVI46620.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24920-25652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 492 0-2 5652 bp Feature: domain Description: GIIM Note: maturase Location: 25766-25925 bp Feature: domain Description: GIIM Note: maturase Location: 2 5766-2 592 5 bp Feature: gene Location: 26281-26493 bp Ori: OVI46621.1 Feature: domain Description: PHA02517 Location: 26284-26458 bp Feature: domain Description: PHA02 517 Location: 2 62 84-2 6458 bp Feature: gene Location: 26590-26790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NDDN01000007.1 Klebsiella pneumoniae strain 44812 44812_NODE_16.ctg_1, whole genome shotgun sequence (96726 bp)
Overview 1 RT 1: 27302-32614 bp Neighborhood of RT #1 [27302, 32778] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27302-28548 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: domain Description: PRK09692 Location: 273 11-28205 bp Feature: gene Location: 28550-29191 bp Feature: gene Location: 29617-30582 bp Ori: OVI46499.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-3 03 22 bp Feature: gene Location: 30560-32152 bp Ori: OVI46500.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG3 950 Location: 3 0740-3 1961 bp Feature: gene Location: 32137-32778 bp Ori: OVI46501.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR02646 Location: 3 223 9-3 2614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)