myRT

myRT report for GCA_002182045.1_ASM218204v1

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Seq: NDEH01000077.1 Klebsiella pneumoniae strain 42194 NODE_68_length_2275_cov_26.5473_ID_135.ctg_1, whole genome shotgun sequence (2275 bp)
Overview 1 RT 1: 1-2274 bp Neighborhood of RT #1 [1, 2275] RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 1-120 bp Feature: gene Location: 201-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495-1119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495-1 1 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1377 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 58-1 377 bp Feature: gene Location: 2142-2275 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2181-2274 bp Feature: domain Description: N6_acetyl_AAC6 Location: 21 81 -2274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)

Seq: NDEH01000075.1 Klebsiella pneumoniae strain 42194 NODE_2_length_484396_cov_50.2588_ID_3.ctg_1, whole genome shotgun sequence (484396 bp)
Overview 1 RT 1: 236724-243101 bp Neighborhood of RT #1 [236724, 243101] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 236724-236975 bp Feature: gene Location: 236972-237841 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 237494-237665 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 37494-2 37665 bp Feature: gene Location: 238497-239597 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 238680-239208 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 38680-2 392 08 bp Feature: gene Location: 239712-241958 bp Feature: domain Description: AAA_15 Location: 239715-240723 bp Feature: domain Description: AAA_15 Location: 2 39715-2 4072 3 bp Feature: gene Location: 242871-243101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)