myRT

myRT report for GCA_002184745.2_ASM218474v2

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Seq: NEZN02000034.1 Klebsiella pneumoniae strain CRK0028 CRK0028_NODE_7.ctg_1, whole genome shotgun sequence (285693 bp)
Overview 1 RT 1: 43792-51173 bp Neighborhood of RT #1 [43792, 51190] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 43792-45030 bp Feature: domain Description: PRK09692 Location: 43798-44980 bp Feature: domain Description: PRK09692 Location: 43798-44980 bp Feature: gene Location: 45210-45665 bp Ori: RNU73755.1 Feature: domain Description: Integrase_1 Location: 45213-45447 bp Feature: domain Description: Integrase_1 Location: 4521 3-45447 bp Feature: gene Location: 45707-47788 bp Ori: RNU73756.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46121-46562 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 461 21 -46562 bp Feature: gene Location: 47785-50379 bp Ori: RNU73757.1 Feature: domain Description: FimD Location: 47827-50368 bp Feature: domain Description: FimD Location: 47827-50368 bp Feature: gene Location: 50426-51190 bp Ori: RNU73758.1 Feature: domain Description: FimC Location: 50471-51173 bp Feature: domain Description: FimC Location: 50471 -51 1 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NEZN02000054.1 Klebsiella pneumoniae strain CRK0028 CRK0028_NODE_38.ctg_1, whole genome shotgun sequence (7062 bp)
Overview 1 RT 1: 4322-6982 bp Neighborhood of RT #1 [4322, 6982] DUF1472 RVT-GII Feature: gene Location: 4322-4414 bp Feature: domain Description: DUF1472 Location: 4334-4400 bp Feature: domain Description: DUF1472 Location: 4334-4400 bp Feature: gene Location: 4638-4868 bp Feature: gene Location: 5102-6610 bp Ori: RNU67380.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5504-6218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5504-62 18 bp Feature: gene Location: 6743-6982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII