myRT

myRT report for GCA_002185975.2_ASM218597v2

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Seq: NEZP02000059.1 Klebsiella pneumoniae strain CRK0025 CRK0025_NODE_34.ctg_1, whole genome shotgun sequence (24620 bp)
Overview 1 RT 1: 11205-15400 bp Neighborhood of RT #1 [11205, 15414] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 11205-11876 bp Ori: RNU91433.1 Feature: domain Description: Plasmid_stab_B Location: 11220-11427 bp Feature: domain Description: Plasmid_stab_B Location: 1 1 220-1 1 427 bp Feature: domain Description: Plasmid_stab_B Location: 11532-11739 bp Feature: domain Description: Plasmid_stab_B Location: 1 1 532-1 1 739 bp Feature: gene Location: 11879-12850 bp Ori: RNU91434.1 Feature: domain Description: StbA Location: 11882-12827 bp Feature: domain Description: StbA Location: 1 1 882-1 2827 bp Feature: gene Location: 13099-14583 bp Ori: RNU91435.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13501-14191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3501 -1 41 91 bp Feature: gene Location: 14583-14834 bp Feature: gene Location: 14989-15414 bp Ori: RNU91445.1 Feature: domain Description: PRK10276 Location: 14992-15400 bp Feature: domain Description: PRK1 0276 Location: 1 4992-1 5400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NEZP02000085.1 Klebsiella pneumoniae strain CRK0025 CRK0025_NODE_4.ctg_1, whole genome shotgun sequence (344889 bp)
Overview 1 RT 1: 81651-89032 bp Neighborhood of RT #1 [81651, 89049] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 81651-82889 bp Feature: domain Description: PRK09692 Location: 81657-82839 bp Feature: domain Description: PRK09692 Location: 81657-82 839 bp Feature: gene Location: 83069-83524 bp Ori: RNU86709.1 Feature: domain Description: Integrase_1 Location: 83072-83306 bp Feature: domain Description: Integrase_1 Location: 83072 -83306 bp Feature: gene Location: 83566-85647 bp Ori: RNU86710.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 83980-84421 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 83980-8442 1 bp Feature: gene Location: 85644-88238 bp Ori: RNU86711.1 Feature: domain Description: FimD Location: 85686-88227 bp Feature: domain Description: FimD Location: 85686-882 2 7 bp Feature: gene Location: 88285-89049 bp Ori: RNU86712.1 Feature: domain Description: FimC Location: 88330-89032 bp Feature: domain Description: FimC Location: 88330-89032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NEZP02000011.1 Klebsiella pneumoniae strain CRK0025 CRK0025_NODE_7.ctg_1, whole genome shotgun sequence (292441 bp)
Overview 1 RT 1: 147386-154273 bp Neighborhood of RT #1 [147386, 154273] tape_meas_TP901 COG5283 COG3499 RVT-UG15 COG5301 Feature: gene Location: 147386-150361 bp Ori: RNV00121.1 Feature: domain Description: tape_meas_TP901 Location: 147950-149000 bp Feature: domain Description: tape_meas_TP901 Location: 147950-149000 bp Feature: domain Description: COG5283 Location: 149327-149765 bp Feature: domain Description: COG5283 Location: 1493 27-149765 bp Feature: gene Location: 150377-150868 bp Ori: RNV00122.1 Feature: domain Description: COG3499 Location: 150380-150812 bp Feature: domain Description: COG3 499 Location: 1503 80-150812 bp Feature: gene Location: 151164-152771 bp Ori: RNV00268.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 151569-151992 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 151569-151992 bp Feature: gene Location: 152964-154061 bp Ori: RNV00123.1 Feature: domain Description: COG5301 Location: 152985-153450 bp Feature: domain Description: COG53 01 Location: 152985-153 450 bp Feature: gene Location: 154061-154273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tape_meas_TP901 (TIGR01760), COG5283 (Phage-related tail protein ), COG3499 (Phage protein U ), RVT-UG15, COG5301 (Phage-related tail fibre protein )

Seq: NEZP02000083.1 Klebsiella pneumoniae strain CRK0025 CRK0025_NODE_27.ctg_1, whole genome shotgun sequence (48473 bp)
Overview 1 RT 1: 479-5905 bp Neighborhood of RT #1 [479, 5976] PRK09692 RVT-UG5 nitrilase PRK09678 Feature: gene Location: 479-1729 bp Ori: RNU87203.1 Feature: domain Description: PRK09692 Location: 488-1688 bp Feature: domain Description: PRK09692 Location: 4 88-1688 bp Feature: gene Location: 1797-4682 bp Ori: RNU87204.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2274-2802 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2274 -2802 bp Feature: domain Description: nitrilase Location: 3978-4608 bp Feature: domain Description: nitrilase Location: 3978-4 608 bp Feature: gene Location: 4679-5368 bp Feature: gene Location: 5704-5976 bp Ori: RNU87206.1 Feature: domain Description: PRK09678 Location: 5713-5905 bp Feature: domain Description: PRK09678 Location: 5713-5905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), PRK09678 (DNA-binding transcriptional regulator; Provisional)