myRT

myRT report for GCA_002186005.2_ASM218600v2

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Seq: NEZV02000110.1 Klebsiella pneumoniae strain CRK0019 CRK0019_NODE_21.ctg_1, whole genome shotgun sequence (99846 bp)
Overview 1 RT 1: 1159-4263 bp Neighborhood of RT #1 [1159, 4277] DUF1472 RVT-GII PRK10276 Feature: gene Location: 1159-1251 bp Feature: domain Description: DUF1472 Location: 1171-1237 bp Feature: domain Description: DUF1 472 Location: 1 1 71 -1 237 bp Feature: gene Location: 1475-1705 bp Feature: gene Location: 1939-3447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2341-3055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2341 -3055 bp Feature: gene Location: 3447-3698 bp Feature: gene Location: 3852-4277 bp Feature: domain Description: PRK10276 Location: 3855-4263 bp Feature: domain Description: PRK1 0276 Location: 3855-4263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NEZV02000048.1 Klebsiella pneumoniae strain CRK0019 CRK0019_NODE_25.ctg_1, whole genome shotgun sequence (75401 bp)
Overview 1 RT 1: 50191-54298 bp Neighborhood of RT #1 [50191, 54300] DinI RVT-GII PRK10276 umuC Feature: gene Location: 50191-50433 bp Feature: domain Description: DinI Location: 50242-50422 bp Feature: domain Description: DinI Location: 502 42 -5042 2 bp Feature: gene Location: 50799-51050 bp Feature: gene Location: 51050-52534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51452-52142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51452 -52 142 bp Feature: gene Location: 52613-53032 bp Feature: domain Description: PRK10276 Location: 52616-53027 bp Feature: domain Description: PRK102 76 Location: 52 616-5302 7 bp Feature: gene Location: 53035-54300 bp Feature: domain Description: umuC Location: 53038-54298 bp Feature: domain Description: umuC Location: 53038-542 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: NEZV02000029.1 Klebsiella pneumoniae strain CRK0019 CRK0019_NODE_10.ctg_1, whole genome shotgun sequence (194606 bp)
Overview 1 RT 1: 112671-118428 bp Neighborhood of RT #1 [112671, 118433] RVT-Retrons Q P Feature: gene Location: 112671-113348 bp Feature: gene Location: 113758-114423 bp Feature: gene Location: 114677-115606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 114776-115361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 114776-1153 61 bp Feature: gene Location: 115642-116667 bp Feature: domain Description: Q Location: 115645-116659 bp Feature: domain Description: Q Location: 115645-116659 bp Feature: gene Location: 116667-118433 bp Feature: domain Description: P Location: 116691-118428 bp Feature: domain Description: P Location: 116691-118428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)