myRT

myRT report for GCA_002186545.1_ASM218654v1

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Seq: NFVO01000024.1 Klebsiella pneumoniae strain PO450 PO450_NODE_28.ctg_1, whole genome shotgun sequence (53347 bp)
Overview 1 RT 1: 45699-50375 bp Neighborhood of RT #1 [45699, 50375] endolysin_R21_like Phage_holin_2_1 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 45699-46196 bp Ori: OVU08466.1 Feature: domain Description: endolysin_R21_like Location: 45780-46182 bp Feature: domain Description: endolysin_R21 _like Location: 45780-461 82 bp Feature: gene Location: 46196-46411 bp Ori: OVU08467.1 Feature: domain Description: Phage_holin_2_1 Location: 46211-46397 bp Feature: domain Description: Phage_holin_2_1 Location: 4621 1 -46397 bp Feature: gene Location: 47765-49097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48071-48518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48071 -4851 8 bp Feature: gene Location: 49649-50320 bp Feature: domain Description: InsA Location: 49655-49922 bp Feature: domain Description: InsA Location: 49655-49922 bp Feature: domain Description: DDE_Tnp_IS1 Location: 50027-50318 bp Feature: domain Description: DDE_Tnp_IS1 Location: 50027-5031 8 bp Feature: gene Location: 50277-50375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT endolysin_R21_like, Phage_holin_2_1 (pfam04971), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: NFVO01000045.1 Klebsiella pneumoniae strain PO450 PO450_NODE_47.ctg_1, whole genome shotgun sequence (11708 bp)
Overview 1 RT 1: 168-2422 bp Neighborhood of RT #1 [168, 2422] RVT-GII GIIM Feature: gene Location: 168-1676 bp Ori: OVU03124.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 6-1158 bp Feature: domain Description: GIIM Note: maturase Location: 1233-1431 bp Feature: domain Description: GIIM Note: maturase Location: 12 33-1431 bp Feature: gene Location: 1762-2070 bp Feature: gene Location: 1985-2422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFVO01000075.1 Klebsiella pneumoniae strain PO450 PO450_NODE_74.ctg_1, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 1-1464 bp Neighborhood of RT #1 [1, 1856] RVT-GII Feature: gene Location: 1-239 bp Feature: gene Location: 372-1856 bp Ori: OVT98525.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFVO01000046.1 Klebsiella pneumoniae strain PO450 PO450_NODE_48.ctg_1, whole genome shotgun sequence (10911 bp)
Overview 1 RT 1: 5631-9470 bp Neighborhood of RT #1 [5631, 9490] INT_Cre_C RVT-GII HHA Feature: gene Location: 5631-5948 bp Feature: gene Location: 6014-7150 bp Ori: OVU03053.1 Feature: domain Description: INT_Cre_C Location: 6437-7091 bp Feature: domain Description: INT_Cre_C Location: 64 37-7091 bp Feature: gene Location: 7236-8720 bp Ori: OVU03054.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7638-8328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7638-8328 bp Feature: gene Location: 8720-8971 bp Feature: gene Location: 9236-9490 bp Ori: OVU03056.1 Feature: domain Description: HHA Location: 9287-9470 bp Feature: domain Description: HHA Location: 9287-94 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: NFVO01000070.1 Klebsiella pneumoniae strain PO450 PO450_NODE_7.ctg_1, whole genome shotgun sequence (268646 bp)
Overview 1 RT 1: 226498-230516 bp Neighborhood of RT #1 [226498, 230666] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 226498-227471 bp Feature: domain Description: PRK09692 Location: 226507-226870 bp Feature: domain Description: PRK09692 Location: 2265 07-226870 bp Feature: domain Description: PRK09692 Location: 226891-227263 bp Feature: domain Description: PRK09692 Location: 226891-227263 bp Feature: gene Location: 227524-228165 bp Ori: OVT99402.1 Feature: domain Description: SLATT_5 Location: 227527-228130 bp Feature: domain Description: SLATT_5 Location: 2275 27-228130 bp Feature: gene Location: 228360-229769 bp Ori: OVT99349.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 228597-229209 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2285 97-229209 bp Feature: gene Location: 229951-230086 bp Feature: gene Location: 230096-230666 bp Feature: domain Description: Psu Location: 230135-230516 bp Feature: domain Description: Psu Location: 230135 -2305 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)