myRT

myRT report for GCA_002186595.1_ASM218659v1

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Seq: NFVJ01000045.1 Klebsiella pneumoniae strain PO906 G906_NODE_5.ctg_1, whole genome shotgun sequence (302935 bp)
Overview 1 RT 1: 264089-271449 bp Neighborhood of RT #1 [264089, 271499] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 264089-264853 bp Ori: OVT81606.1 Feature: domain Description: FimC Location: 264134-264836 bp Feature: domain Description: FimC Location: 2641 34-264836 bp Feature: gene Location: 264900-267494 bp Ori: OVT81607.1 Feature: domain Description: FimD Location: 264942-267483 bp Feature: domain Description: FimD Location: 264942-267483 bp Feature: gene Location: 267491-269572 bp Ori: OVT81608.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 267902-268346 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 267902-268346 bp Feature: gene Location: 269614-270069 bp Ori: OVT81609.1 Feature: domain Description: Integrase_1 Location: 269617-269851 bp Feature: domain Description: Integrase_1 Location: 26961 7-269851 bp Feature: gene Location: 270249-271499 bp Feature: domain Description: PRK09692 Location: 270252-271449 bp Feature: domain Description: PRK09692 Location: 270252-271 449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: NFVJ01000042.1 Klebsiella pneumoniae strain PO906 G906_NODE_47.ctg_1, whole genome shotgun sequence (14369 bp)
Overview 1 RT 1: 7298-10321 bp Neighborhood of RT #1 [7298, 10321] PHA02517 RVT-GII GIIM Feature: gene Location: 7298-7483 bp Feature: gene Location: 7549-8031 bp Feature: domain Description: PHA02517 Location: 7567-8005 bp Feature: domain Description: PHA02 517 Location: 7567-8005 bp Feature: gene Location: 8100-9608 bp Ori: OVT82013.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8358-9090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8358-9090 bp Feature: domain Description: GIIM Note: maturase Location: 9165-9363 bp Feature: domain Description: GIIM Note: maturase Location: 9165-9363 bp Feature: gene Location: 9694-10002 bp Feature: gene Location: 9917-10321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NFVJ01000043.1 Klebsiella pneumoniae strain PO906 G906_NODE_48.ctg_1, whole genome shotgun sequence (14052 bp)
Overview 1 RT 1: 4241-7973 bp Neighborhood of RT #1 [4241, 7987] Antirestrict RVT-GII PRK10276 Feature: gene Location: 4241-4666 bp Ori: OVT81972.1 Feature: domain Description: Antirestrict Location: 4376-4664 bp Feature: domain Description: Antirestrict Location: 43 76-4664 bp Feature: gene Location: 5186-5416 bp Feature: gene Location: 5649-7157 bp Ori: OVT81973.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6051-6765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6051-6765 bp Feature: gene Location: 7157-7408 bp Feature: gene Location: 7562-7987 bp Ori: OVT81975.1 Feature: domain Description: PRK10276 Location: 7565-7973 bp Feature: domain Description: PRK10276 Location: 7565-7973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)