myRT

myRT report for GCA_002186625.1_ASM218662v1

Download annotations/find similar RTs

Seq: NFVL01000062.1 Klebsiella pneumoniae strain PO613 PO613_NODE_65.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OVT94582.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFVL01000024.1 Klebsiella pneumoniae strain PO613 PO613_NODE_30.ctg_1, whole genome shotgun sequence (40152 bp)
Overview 1 RT 1: 27302-32614 bp Neighborhood of RT #1 [27302, 32778] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27302-28548 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: domain Description: PRK09692 Location: 2 7311-2 82 05 bp Feature: gene Location: 28595-29191 bp Feature: gene Location: 29617-30582 bp Ori: OVT99609.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 972 5-3032 2 bp Feature: gene Location: 30560-32152 bp Ori: OVT99610.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: gene Location: 32137-32778 bp Ori: OVT99611.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR02 646 Location: 32 2 39-32 614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: NFVL01000041.1 Klebsiella pneumoniae strain PO613 PO613_NODE_46.ctg_1, whole genome shotgun sequence (9182 bp)
Overview 1 RT 1: 4122-7145 bp Neighborhood of RT #1 [4122, 7145] PHA02517 RVT-GII GIIM Feature: gene Location: 4122-4307 bp Feature: gene Location: 4373-4855 bp Feature: domain Description: PHA02517 Location: 4391-4829 bp Feature: domain Description: PHA02517 Location: 43 91-4829 bp Feature: gene Location: 4924-6432 bp Ori: OVT97081.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5182-5914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5182-5914 bp Feature: domain Description: GIIM Note: maturase Location: 5989-6187 bp Feature: domain Description: GIIM Note: maturase Location: 5989-6187 bp Feature: gene Location: 6518-6826 bp Feature: gene Location: 6741-7145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NFVL01000003.1 Klebsiella pneumoniae strain PO613 PO613_NODE_11.ctg_1, whole genome shotgun sequence (179699 bp)
Overview 1 RT 1: 137791-141809 bp Neighborhood of RT #1 [137791, 141959] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 137791-138764 bp Feature: domain Description: PRK09692 Location: 137800-138163 bp Feature: domain Description: PRK09692 Location: 137800-138163 bp Feature: domain Description: PRK09692 Location: 138184-138556 bp Feature: domain Description: PRK09692 Location: 138184 -138556 bp Feature: gene Location: 138817-139458 bp Ori: OVU05958.1 Feature: domain Description: SLATT_5 Location: 138820-139423 bp Feature: domain Description: SLATT_5 Location: 138820-1394 23 bp Feature: gene Location: 139653-141062 bp Ori: OVU05910.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 139890-140502 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 139890-14 0502 bp Feature: gene Location: 141244-141379 bp Feature: gene Location: 141389-141959 bp Feature: domain Description: Psu Location: 141428-141809 bp Feature: domain Description: Psu Location: 14 14 28-14 1809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)