myRT

myRT report for GCA_002186695.1_ASM218669v1

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Seq: NFVU01000020.1 Klebsiella pneumoniae strain PO2673 PO2673_NODE_27.ctg_1, whole genome shotgun sequence (47938 bp)
Overview 1 RT 1: 502-7487 bp Neighborhood of RT #1 [502, 7504] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 502-1344 bp Feature: domain Description: INT_P4_C Location: 703-1282 bp Feature: domain Description: INT_P4_C Location: 703-1 282 bp Feature: gene Location: 1524-1979 bp Ori: OVU40180.1 Feature: domain Description: Integrase_1 Location: 1527-1761 bp Feature: domain Description: Integrase_1 Location: 1 527-1 761 bp Feature: gene Location: 2021-4102 bp Ori: OVU40181.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2432-2876 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2432-2876 bp Feature: gene Location: 4099-6693 bp Ori: OVU40182.1 Feature: domain Description: FimD Location: 4141-6682 bp Feature: domain Description: FimD Location: 41 41 -6682 bp Feature: gene Location: 6740-7504 bp Ori: OVU40183.1 Feature: domain Description: FimC Location: 6785-7487 bp Feature: domain Description: FimC Location: 6785-7487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NFVU01000044.1 Klebsiella pneumoniae strain PO2673 PO2673_NODE_49.ctg_1, whole genome shotgun sequence (3108 bp)
Overview 1 RT 1: 236-2490 bp Neighborhood of RT #1 [236, 2490] RVT-GII GIIM Feature: gene Location: 236-1744 bp Ori: OVU36906.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-12 2 6 bp Feature: domain Description: GIIM Note: maturase Location: 1301-1499 bp Feature: domain Description: GIIM Note: maturase Location: 1301-1499 bp Feature: gene Location: 1830-2138 bp Feature: gene Location: 2053-2490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFVU01000071.1 Klebsiella pneumoniae strain PO2673 PO2673_NODE_8.ctg_1, whole genome shotgun sequence (249526 bp)
Overview 1 RT 1: 15035-21373 bp Neighborhood of RT #1 [15035, 21373] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 15035-15286 bp Feature: gene Location: 15283-16152 bp Ori: OVU32752.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 15805-15976 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 15805-15976 bp Feature: gene Location: 16808-17908 bp Ori: OVU32753.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16988-17522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16988-17522 bp Feature: gene Location: 18023-20269 bp Ori: OVU32754.1 Feature: domain Description: AAA_15 Location: 18026-19034 bp Feature: domain Description: AAA_15 Location: 18026-1903 4 bp Feature: gene Location: 21182-21373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NFVU01000033.1 Klebsiella pneumoniae strain PO2673 PO2673_NODE_39.ctg_1, whole genome shotgun sequence (14075 bp)
Overview 1 RT 1: 5186-7998 bp Neighborhood of RT #1 [5186, 8012] RVT-GII PRK10276 Feature: gene Location: 5186-5416 bp Feature: gene Location: 5441-5632 bp Feature: gene Location: 5650-7182 bp Ori: OVU38174.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6052-6790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6052-6790 bp Feature: gene Location: 7182-7433 bp Feature: gene Location: 7587-8012 bp Ori: OVU38176.1 Feature: domain Description: PRK10276 Location: 7590-7998 bp Feature: domain Description: PRK10276 Location: 7590-7998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NFVU01000029.1 Klebsiella pneumoniae strain PO2673 PO2673_NODE_35.ctg_1, whole genome shotgun sequence (26418 bp)
Overview 1 RT 1: 21012-25665 bp Neighborhood of RT #1 [21012, 25682] ArdC RVT-GII PRK10276 Feature: gene Location: 21012-21443 bp Feature: gene Location: 21923-22888 bp Ori: OVU38750.1 Feature: domain Description: ArdC Location: 22049-22883 bp Feature: domain Description: ArdC Location: 22049-22883 bp Feature: gene Location: 23358-24842 bp Ori: OVU38751.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23760-24450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23760-2445 0 bp Feature: gene Location: 24842-25093 bp Feature: gene Location: 25251-25682 bp Ori: OVU38753.1 Feature: domain Description: PRK10276 Location: 25302-25665 bp Feature: domain Description: PRK10276 Location: 25 302-25 665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)