myRT

myRT report for GCA_002186705.1_ASM218670v1

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Seq: NFVR01000116.1 Klebsiella pneumoniae strain PO379 PO379_NODE_89.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OVU16499.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFVR01000013.1 Klebsiella pneumoniae strain PO379 PO379_NODE_11.ctg_1, whole genome shotgun sequence (136680 bp)
Overview 1 RT 1: 47237-55893 bp Neighborhood of RT #1 [47237, 55910] EAL RVT-UG4 FimD FimC Feature: gene Location: 47237-48209 bp Feature: gene Location: 48413-49799 bp Feature: domain Description: EAL Location: 49058-49328 bp Feature: domain Description: EAL Location: 49058-4932 8 bp Feature: gene Location: 50475-52505 bp Ori: OVU32448.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883-51327 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883-5132 7 bp Feature: gene Location: 52505-55099 bp Ori: OVU32449.1 Feature: domain Description: FimD Location: 52547-55088 bp Feature: domain Description: FimD Location: 52 547-55088 bp Feature: gene Location: 55146-55910 bp Ori: OVU32367.1 Feature: domain Description: FimC Location: 55191-55893 bp Feature: domain Description: FimC Location: 55191-55893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NFVR01000087.1 Klebsiella pneumoniae strain PO379 PO379_NODE_62.ctg_1, whole genome shotgun sequence (9178 bp)
Overview 1 RT 1: 4118-7141 bp Neighborhood of RT #1 [4118, 7141] PHA02517 RVT-GII GIIM Feature: gene Location: 4118-4303 bp Feature: gene Location: 4369-4851 bp Feature: domain Description: PHA02517 Location: 4387-4825 bp Feature: domain Description: PHA02517 Location: 43 87-4825 bp Feature: gene Location: 4920-6428 bp Ori: OVU19582.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5178-5910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5178-5910 bp Feature: domain Description: GIIM Note: maturase Location: 5985-6183 bp Feature: domain Description: GIIM Note: maturase Location: 5985-6183 bp Feature: gene Location: 6514-6822 bp Feature: gene Location: 6737-7141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)