myRT

myRT report for GCA_002186945.1_ASM218694v1

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Seq: NFWH01000102.1 Klebsiella pneumoniae strain PO1238 PO1238_NODE_57.ctg_1, whole genome shotgun sequence (16993 bp)
Overview 1 RT 1: 4118-7141 bp Neighborhood of RT #1 [4118, 7141] PHA02517 RVT-GII GIIM Feature: gene Location: 4118-4303 bp Feature: gene Location: 4369-4851 bp Feature: domain Description: PHA02517 Location: 4387-4825 bp Feature: domain Description: PHA0251 7 Location: 4387-4825 bp Feature: gene Location: 4920-6428 bp Ori: OVV03054.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5178-5910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 78-591 0 bp Feature: domain Description: GIIM Note: maturase Location: 5985-6183 bp Feature: domain Description: GIIM Note: maturase Location: 5985-61 83 bp Feature: gene Location: 6514-6822 bp Feature: gene Location: 6737-7141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NFWH01000010.1 Klebsiella pneumoniae strain PO1238 PO1238_NODE_107.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 99-1442 bp Neighborhood of RT #1 [99, 1834] RVT-GII Feature: gene Location: 99-350 bp Feature: gene Location: 350-1834 bp Ori: OVV14608.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFWH01000071.1 Klebsiella pneumoniae strain PO1238 PO1238_NODE_29.ctg_1, whole genome shotgun sequence (59902 bp)
Overview 1 RT 1: 3993-12666 bp Neighborhood of RT #1 [3993, 12666] FimC FimD RVT-UG4 EAL Feature: gene Location: 3993-4757 bp Ori: OVV08036.1 Feature: domain Description: FimC Location: 4038-4740 bp Feature: domain Description: FimC Location: 403 8-4740 bp Feature: gene Location: 4804-7398 bp Ori: OVV08037.1 Feature: domain Description: FimD Location: 4846-7387 bp Feature: domain Description: FimD Location: 4846-73 87 bp Feature: gene Location: 7398-9428 bp Ori: OVV08087.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7806-8250 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7806-8250 bp Feature: gene Location: 10104-11490 bp Feature: domain Description: EAL Location: 10749-11019 bp Feature: domain Description: EAL Location: 10749-11019 bp Feature: gene Location: 11694-12666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)