myRT

myRT report for GCA_002187025.1_ASM218702v1

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Seq: NFWP01000038.1 Klebsiella pneumoniae strain G749 G749_NODE_43.ctg_1, whole genome shotgun sequence (14052 bp)
Overview 1 RT 1: 4241-7973 bp Neighborhood of RT #1 [4241, 7987] Antirestrict RVT-GII PRK10276 Feature: gene Location: 4241-4666 bp Ori: OVV45616.1 Feature: domain Description: Antirestrict Location: 4376-4664 bp Feature: domain Description: Antirestrict Location: 4376-4664 bp Feature: gene Location: 5186-5416 bp Feature: gene Location: 5649-7157 bp Ori: OVV45617.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6051-6765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6051 -6765 bp Feature: gene Location: 7157-7408 bp Feature: gene Location: 7562-7987 bp Ori: OVV45619.1 Feature: domain Description: PRK10276 Location: 7565-7973 bp Feature: domain Description: PRK1 0276 Location: 7565-7973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NFWP01000056.1 Klebsiella pneumoniae strain G749 G749_NODE_6.ctg_1, whole genome shotgun sequence (307189 bp)
Overview 1 RT 1: 268343-275703 bp Neighborhood of RT #1 [268343, 275753] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 268343-269107 bp Ori: OVV43559.1 Feature: domain Description: FimC Location: 268388-269090 bp Feature: domain Description: FimC Location: 2 68388-2 69090 bp Feature: gene Location: 269154-271748 bp Ori: OVV43560.1 Feature: domain Description: FimD Location: 269196-271737 bp Feature: domain Description: FimD Location: 2 69196-2 71737 bp Feature: gene Location: 271745-273826 bp Ori: OVV43561.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 272156-272600 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 72 156-2 72 600 bp Feature: gene Location: 273868-274323 bp Ori: OVV43562.1 Feature: domain Description: Integrase_1 Location: 273871-274105 bp Feature: domain Description: Integrase_1 Location: 2 73871-2 74105 bp Feature: gene Location: 274503-275753 bp Feature: domain Description: PRK09692 Location: 274506-275703 bp Feature: domain Description: PRK09692 Location: 2 74506-2 75703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: NFWP01000037.1 Klebsiella pneumoniae strain G749 G749_NODE_42.ctg_1, whole genome shotgun sequence (14369 bp)
Overview 1 RT 1: 7298-10321 bp Neighborhood of RT #1 [7298, 10321] PHA02517 RVT-GII GIIM Feature: gene Location: 7298-7483 bp Feature: gene Location: 7549-8031 bp Feature: domain Description: PHA02517 Location: 7567-8005 bp Feature: domain Description: PHA02517 Location: 7567-8005 bp Feature: gene Location: 8100-9608 bp Ori: OVV45644.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8358-9090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 58-9090 bp Feature: domain Description: GIIM Note: maturase Location: 9165-9363 bp Feature: domain Description: GIIM Note: maturase Location: 9165-93 63 bp Feature: gene Location: 9694-10002 bp Feature: gene Location: 9917-10321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)