myRT

myRT report for GCA_002187145.1_ASM218714v1

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Seq: NFWW01000084.1 Klebsiella pneumoniae strain G4712 G4712_NODE_77.ctg_1, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 278-586 bp Feature: gene Location: 672-2180 bp Ori: OVV79229.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFWW01000026.1 Klebsiella pneumoniae strain G4712 G4712_NODE_24.ctg_1, whole genome shotgun sequence (79079 bp)
Overview 1 RT 1: 37171-41189 bp Neighborhood of RT #1 [37171, 41339] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 37171-38144 bp Feature: domain Description: PRK09692 Location: 37180-37543 bp Feature: domain Description: PRK09692 Location: 37180-37543 bp Feature: domain Description: PRK09692 Location: 37564-37936 bp Feature: domain Description: PRK09692 Location: 37564-37936 bp Feature: gene Location: 38197-38838 bp Ori: OVV87667.1 Feature: domain Description: SLATT_5 Location: 38200-38803 bp Feature: domain Description: SLATT_5 Location: 382 00-38803 bp Feature: gene Location: 39033-40442 bp Ori: OVV87627.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39270-39882 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 392 70-39882 bp Feature: gene Location: 40624-40759 bp Feature: gene Location: 40769-41339 bp Feature: domain Description: Psu Location: 40808-41189 bp Feature: domain Description: Psu Location: 40808-41189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)

Seq: NFWW01000031.1 Klebsiella pneumoniae strain G4712 G4712_NODE_29.ctg_1, whole genome shotgun sequence (54129 bp)
Overview 1 RT 1: 52560-54128 bp Neighborhood of RT #1 [52560, 54129] DinI RVT-GII Feature: gene Location: 52560-52802 bp Ori: OVV86580.1 Feature: domain Description: DinI Location: 52611-52791 bp Feature: domain Description: DinI Location: 52611-52791 bp Feature: gene Location: 53169-53420 bp Feature: gene Location: 53420-54129 bp Ori: OVV86582.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53822-54128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 822-54128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII

Seq: NFWW01000108.1 Klebsiella pneumoniae strain G4712 G4712_NODE_99.ctg_1, whole genome shotgun sequence (911 bp)
Overview 1 RT 1: 60-519 bp Neighborhood of RT #1 [60, 911] RVT-GII Feature: gene Location: 60-911 bp Ori: OVV76591.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFWW01000023.1 Klebsiella pneumoniae strain G4712 G4712_NODE_21.ctg_1, whole genome shotgun sequence (97030 bp)
Overview 1 RT 1: 27302-32614 bp Neighborhood of RT #1 [27302, 32778] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27302-28548 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: gene Location: 28595-29191 bp Feature: gene Location: 29617-30582 bp Ori: OVV88022.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725 -30322 bp Feature: gene Location: 30560-32152 bp Ori: OVV88023.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG395 0 Location: 30740-31961 bp Feature: gene Location: 32137-32778 bp Ori: OVV88024.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR02646 Location: 32239-32614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)