myRT

myRT report for GCA_002187245.1_ASM218724v1

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Seq: NFXH01000066.1 Klebsiella pneumoniae strain G3704 G3704_NODE_69.ctg_1, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 278-586 bp Feature: gene Location: 672-2180 bp Ori: OVW40859.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFXH01000012.1 Klebsiella pneumoniae strain G3704 G3704_NODE_2.ctg_1, whole genome shotgun sequence (427070 bp)
Overview 1 RT 1: 27333-32645 bp Neighborhood of RT #1 [27333, 32809] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27333-28579 bp Feature: domain Description: PRK09692 Location: 27342-28236 bp Feature: domain Description: PRK09692 Location: 2 7342 -2 82 36 bp Feature: gene Location: 28626-29222 bp Feature: gene Location: 29648-30613 bp Ori: OVW48666.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29756-30353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 9756-30353 bp Feature: gene Location: 30591-32183 bp Ori: OVW48667.1 Feature: domain Description: COG3950 Location: 30771-31992 bp Feature: domain Description: COG3950 Location: 30771-31992 bp Feature: gene Location: 32168-32809 bp Ori: OVW48668.1 Feature: domain Description: TIGR02646 Location: 32270-32645 bp Feature: domain Description: TIGR02 646 Location: 32 2 70-32 645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: NFXH01000069.1 Klebsiella pneumoniae strain G3704 G3704_NODE_71.ctg_1, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1796 bp Neighborhood of RT #1 [61, 1796] RVT-GII Feature: gene Location: 61-1545 bp Ori: OVW39950.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463 -1153 bp Feature: gene Location: 1545-1796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFXH01000016.1 Klebsiella pneumoniae strain G3704 G3704_NODE_23.ctg_1, whole genome shotgun sequence (79082 bp)
Overview 1 RT 1: 37174-41192 bp Neighborhood of RT #1 [37174, 41342] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 37174-38147 bp Feature: domain Description: PRK09692 Location: 37183-37546 bp Feature: domain Description: PRK09692 Location: 37183-3754 6 bp Feature: domain Description: PRK09692 Location: 37567-37939 bp Feature: domain Description: PRK09692 Location: 37567-37939 bp Feature: gene Location: 38200-38841 bp Ori: OVW47420.1 Feature: domain Description: SLATT_5 Location: 38203-38806 bp Feature: domain Description: SLATT_5 Location: 38203-38806 bp Feature: gene Location: 39036-40445 bp Ori: OVW47380.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39273-39885 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39273-39885 bp Feature: gene Location: 40627-40762 bp Feature: gene Location: 40772-41342 bp Feature: domain Description: Psu Location: 40811-41192 bp Feature: domain Description: Psu Location: 4 0811-4 1192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)