myRT

myRT report for GCA_002187255.1_ASM218725v1

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Seq: NFXF01000019.1 Klebsiella pneumoniae strain G4348 G4348_NODE_26.ctg_1, whole genome shotgun sequence (60937 bp)
Overview 1 RT 1: 6192-8994 bp Neighborhood of RT #1 [6192, 8994] PRK10276 RVT-GII Feature: gene Location: 6192-6617 bp Ori: OVW33293.1 Feature: domain Description: PRK10276 Location: 6195-6603 bp Feature: domain Description: PRK1 0276 Location: 61 95-6603 bp Feature: gene Location: 6771-7022 bp Feature: gene Location: 7022-8530 bp Ori: OVW33295.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7424-8138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7424-81 38 bp Feature: gene Location: 8548-8739 bp Feature: gene Location: 8764-8994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NFXF01000045.1 Klebsiella pneumoniae strain G4348 G4348_NODE_5.ctg_1, whole genome shotgun sequence (333033 bp)
Overview 1 RT 1: 47652-54637 bp Neighborhood of RT #1 [47652, 54654] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 47652-48494 bp Feature: domain Description: INT_P4_C Location: 47853-48432 bp Feature: domain Description: INT_P4_C Location: 47853-48432 bp Feature: gene Location: 48721-49174 bp Feature: domain Description: Integrase_1 Location: 48739-49003 bp Feature: domain Description: Integrase_1 Location: 48739-49003 bp Feature: gene Location: 49171-51252 bp Ori: OVW29607.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49582-50026 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49582 -5002 6 bp Feature: gene Location: 51249-53843 bp Ori: OVW29608.1 Feature: domain Description: FimD Location: 51291-53832 bp Feature: domain Description: FimD Location: 512 91-53832 bp Feature: gene Location: 53890-54654 bp Ori: OVW29609.1 Feature: domain Description: FimC Location: 53935-54637 bp Feature: domain Description: FimC Location: 53935-54637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)