myRT

myRT report for GCA_002187335.1_ASM218733v1

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Seq: NFXL01000028.1 Klebsiella pneumoniae strain G292 G292_NODE_34.ctg_1, whole genome shotgun sequence (38602 bp)
Overview 1 RT 1: 77-7077 bp Neighborhood of RT #1 [77, 7127] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 77-481 bp Feature: domain Description: FimC Location: 80-464 bp Feature: domain Description: FimC Location: 80-464 bp Feature: gene Location: 528-3122 bp Ori: OVW63204.1 Feature: domain Description: FimD Location: 570-3111 bp Feature: domain Description: FimD Location: 570-31 1 1 bp Feature: gene Location: 3119-5200 bp Ori: OVW63205.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3530-3974 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3530-3974 bp Feature: gene Location: 5242-5697 bp Ori: OVW63206.1 Feature: domain Description: Integrase_1 Location: 5245-5479 bp Feature: domain Description: Integrase_1 Location: 5245-5479 bp Feature: gene Location: 5877-7127 bp Feature: domain Description: PRK09692 Location: 5880-7077 bp Feature: domain Description: PRK09692 Location: 5880-7077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: NFXL01000001.1 Klebsiella pneumoniae strain G292 G292_NODE_1.ctg_1, whole genome shotgun sequence (602712 bp)
Overview 1 RT 1: 233680-240018 bp Neighborhood of RT #1 [233680, 240018] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 233680-233871 bp Feature: gene Location: 234784-237030 bp Ori: OVW71473.1 Feature: domain Description: AAA_15 Location: 234787-235795 bp Feature: domain Description: AAA_15 Location: 2 34787-2 35795 bp Feature: gene Location: 237145-238245 bp Ori: OVW71474.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 237325-237859 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3732 5-2 37859 bp Feature: gene Location: 238901-239770 bp Ori: OVW71475.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 239423-239594 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 3942 3-2 39594 bp Feature: gene Location: 239767-240018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: NFXL01000063.1 Klebsiella pneumoniae strain G292 G292_NODE_66.ctg_1, whole genome shotgun sequence (1546 bp)
Overview 1 RT 1: 61-1153 bp Neighborhood of RT #1 [61, 1545] RVT-GII Feature: gene Location: 61-1545 bp Ori: OVW58876.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463 -1153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII