myRT

myRT report for GCA_002187385.1_ASM218738v1

Download annotations/find similar RTs

Seq: NFXO01000027.1 Klebsiella pneumoniae strain G2280 G2280_NODE_33.ctg_1, whole genome shotgun sequence (54602 bp)
Overview 1 RT 1: 18049-24610 bp Neighborhood of RT #1 [18049, 24615] AAA_15 RVT-Retrons a_cpa1 Feature: gene Location: 18049-18240 bp Feature: gene Location: 19149-21395 bp Feature: domain Description: AAA_15 Location: 19152-20160 bp Feature: domain Description: AAA_1 5 Location: 1 91 52-201 60 bp Feature: gene Location: 21510-22610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21693-22221 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 693-22221 bp Feature: gene Location: 22791-23036 bp Feature: gene Location: 22981-24615 bp Feature: domain Description: a_cpa1 Location: 23008-24610 bp Feature: domain Description: a_cpa1 Location: 23008-2461 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, a_cpa1 (TIGR00831)

Seq: NFXO01000039.1 Klebsiella pneumoniae strain G2280 G2280_NODE_44.ctg_1, whole genome shotgun sequence (34411 bp)
Overview 1 RT 1: 25545-28333 bp Neighborhood of RT #1 [25545, 28347] RVT-GII PRK10276 Feature: gene Location: 25545-25775 bp Feature: gene Location: 25800-25991 bp Feature: gene Location: 26009-27517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26411-27125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6411-2 712 5 bp Feature: gene Location: 27517-27768 bp Feature: gene Location: 27922-28347 bp Feature: domain Description: PRK10276 Location: 27925-28333 bp Feature: domain Description: PRK102 76 Location: 2 792 5-2 8333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)