myRT

myRT report for GCA_002187395.1_ASM218739v1

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Seq: NFXP01000024.1 Klebsiella pneumoniae strain G2275 G2275_NODE_30.ctg_1, whole genome shotgun sequence (30622 bp)
Overview 1 RT 1: 21756-24544 bp Neighborhood of RT #1 [21756, 24558] RVT-GII PRK10276 Feature: gene Location: 21756-21986 bp Feature: gene Location: 22011-22202 bp Feature: gene Location: 22220-23728 bp Ori: OVW84280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22622-23336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22622-23336 bp Feature: gene Location: 23728-23979 bp Feature: gene Location: 24133-24558 bp Ori: OVW84282.1 Feature: domain Description: PRK10276 Location: 24136-24544 bp Feature: domain Description: PRK1 0276 Location: 241 36-24544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NFXP01000059.1 Klebsiella pneumoniae strain G2275 G2275_NODE_7.ctg_1, whole genome shotgun sequence (272559 bp)
Overview 1 RT 1: 31681-38666 bp Neighborhood of RT #1 [31681, 38683] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31681-32523 bp Feature: domain Description: INT_P4_C Location: 31882-32461 bp Feature: domain Description: INT_P4_C Location: 31882 -32 461 bp Feature: gene Location: 32750-33203 bp Feature: domain Description: Integrase_1 Location: 32768-33032 bp Feature: domain Description: Integrase_1 Location: 32 768-33032 bp Feature: gene Location: 33200-35281 bp Ori: OVW78319.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33611-34055 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33611-34055 bp Feature: gene Location: 35278-37872 bp Ori: OVW78320.1 Feature: domain Description: FimD Location: 35320-37861 bp Feature: domain Description: FimD Location: 3532 0-37861 bp Feature: gene Location: 37919-38683 bp Ori: OVW78321.1 Feature: domain Description: FimC Location: 37964-38666 bp Feature: domain Description: FimC Location: 37964-38666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NFXP01000001.1 Klebsiella pneumoniae strain G2275 G2275_NODE_1.ctg_1, whole genome shotgun sequence (890339 bp)
Overview 1 RT 1: 918-3876 bp Neighborhood of RT #1 [918, 4076] RVT-GII PRK10276 Feature: gene Location: 918-1247 bp Feature: gene Location: 1701-1952 bp Feature: gene Location: 1952-3436 bp Ori: OVW91099.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2354-3044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 54-3 044 bp Feature: gene Location: 3352-3604 bp Feature: gene Location: 3708-4076 bp Ori: OVW91100.1 Feature: domain Description: PRK10276 Location: 3753-3876 bp Feature: domain Description: PRK10276 Location: 3 753 -3 876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NFXP01000011.1 Klebsiella pneumoniae strain G2275 G2275_NODE_19.ctg_1, whole genome shotgun sequence (91777 bp)
Overview 1 RT 1: 72032-79165 bp Neighborhood of RT #1 [72032, 79167] conj_conj_conj_TIGR03755 TraG_N RVT-UG5 COG3440 GlgS Feature: gene Location: 72032-73393 bp Ori: OVW88222.1 Feature: domain Description: conj_conj_conj_TIGR03755 Location: 72122-73370 bp Feature: domain Description: conj_conj_conj_TIGR03755 Location: 72122-73370 bp Feature: gene Location: 73390-74877 bp Ori: OVW88223.1 Feature: domain Description: TraG_N Location: 73414-74824 bp Feature: domain Description: TraG_N Location: 734 14 -74 824 bp Feature: gene Location: 74942-77884 bp Ori: OVW88224.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 75443-75902 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 754 4 3-75902 bp Feature: gene Location: 78056-78928 bp Ori: OVW88225.1 Feature: domain Description: COG3440 Location: 78074-78920 bp Feature: domain Description: COG34 4 0 Location: 78074 -78920 bp Feature: gene Location: 78967-79167 bp Ori: OVW88237.1 Feature: domain Description: GlgS Location: 78970-79165 bp Feature: domain Description: GlgS Location: 78970-79165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_conj_conj_TIGR03755, TraG_N (pfam07916), RVT-UG5, COG3440 (Predicted restriction endonuclease ), GlgS (pfam08971)