myRT

myRT report for GCA_002187405.1_ASM218740v1

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Seq: NFXS01000023.1 Klebsiella pneumoniae strain G1598 G1598_NODE_3.ctg_1, whole genome shotgun sequence (340393 bp)
Overview 1 RT 1: 332699-337651 bp Neighborhood of RT #1 [332699, 337659] PRK09692 RVT-Retrons Psu Feature: gene Location: 332699-333865 bp Ori: OVW99786.1 Feature: domain Description: PRK09692 Location: 332708-333851 bp Feature: domain Description: PRK09692 Location: 332708-333851 bp Feature: gene Location: 333899-334381 bp Feature: gene Location: 334378-335304 bp Ori: OVW99788.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 334483-335068 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 334483-335068 bp Feature: gene Location: 335291-336271 bp Feature: gene Location: 337093-337659 bp Ori: OVW99790.1 Feature: domain Description: Psu Location: 337111-337651 bp Feature: domain Description: Psu Location: 3371 1 1 -337651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455)

Seq: NFXS01000063.1 Klebsiella pneumoniae strain G1598 G1598_NODE_8.ctg_1, whole genome shotgun sequence (284102 bp)
Overview 1 RT 1: 43764-52420 bp Neighborhood of RT #1 [43764, 52437] EAL RVT-UG4 FimD FimC Feature: gene Location: 43764-44736 bp Feature: gene Location: 44940-46326 bp Feature: domain Description: EAL Location: 45585-45855 bp Feature: domain Description: EAL Location: 45585-45855 bp Feature: gene Location: 47002-49032 bp Ori: OVW93243.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47410-47854 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47410-47854 bp Feature: gene Location: 49032-51626 bp Ori: OVW93019.1 Feature: domain Description: FimD Location: 49074-51615 bp Feature: domain Description: FimD Location: 49074-51615 bp Feature: gene Location: 51673-52437 bp Ori: OVW93020.1 Feature: domain Description: FimC Location: 51718-52420 bp Feature: domain Description: FimC Location: 51718-52 42 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)