myRT

myRT report for GCA_002187475.1_ASM218747v1

Download annotations/find similar RTs

Seq: NFXW01000060.1 Klebsiella pneumoniae strain G1015 G1015_NODE_7.ctg_1, whole genome shotgun sequence (267725 bp)
Overview 1 RT 1: 58153-64491 bp Neighborhood of RT #1 [58153, 64491] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 58153-58404 bp Feature: gene Location: 58401-59270 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 58923-59094 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 58923-59094 bp Feature: gene Location: 59926-61026 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60109-60637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 601 09-60637 bp Feature: gene Location: 61141-63387 bp Feature: domain Description: AAA_15 Location: 61144-62152 bp Feature: domain Description: AAA_1 5 Location: 61 1 44-621 52 bp Feature: gene Location: 64300-64491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NFXW01000030.1 Klebsiella pneumoniae strain G1015 G1015_NODE_36.ctg_1, whole genome shotgun sequence (13924 bp)
Overview 1 RT 1: 1049-4072 bp Neighborhood of RT #1 [1049, 4072] PHA02517 RVT-GII GIIM Feature: gene Location: 1049-1234 bp Feature: gene Location: 1300-1782 bp Feature: domain Description: PHA02517 Location: 1318-1756 bp Feature: domain Description: PHA02 517 Location: 1318-1756 bp Feature: gene Location: 1851-3359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2109-2841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 109-2 841 bp Feature: domain Description: GIIM Note: maturase Location: 2916-3114 bp Feature: domain Description: GIIM Note: maturase Location: 2 916-3114 bp Feature: gene Location: 3445-3753 bp Feature: gene Location: 3668-4072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)