myRT

myRT report for GCA_002187655.1_ASM218765v1

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Seq: NFYM01000079.1 Klebsiella pneumoniae strain AK_905 AK-905_NODE_80.ctg_1, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 97-1440 bp Neighborhood of RT #1 [97, 1832] RVT-GII Feature: gene Location: 97-348 bp Feature: gene Location: 348-1832 bp Ori: OVY05240.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1 440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFYM01000053.1 Klebsiella pneumoniae strain AK_905 AK-905_NODE_57.ctg_1, whole genome shotgun sequence (19415 bp)
Overview 1 RT 1: 14072-17095 bp Neighborhood of RT #1 [14072, 17095] RVT-GII GIIM PHA02517 Feature: gene Location: 14072-14476 bp Feature: gene Location: 14391-14699 bp Feature: gene Location: 14785-16293 bp Ori: OVY06807.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15043-15775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15043-15775 bp Feature: domain Description: GIIM Note: maturase Location: 15850-16048 bp Feature: domain Description: GIIM Note: maturase Location: 15850-16048 bp Feature: gene Location: 16362-16844 bp Feature: domain Description: PHA02517 Location: 16380-16818 bp Feature: domain Description: PHA02 517 Location: 16380-16818 bp Feature: gene Location: 16910-17095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NFYM01000006.1 Klebsiella pneumoniae strain AK_905 AK-905_NODE_14.ctg_1, whole genome shotgun sequence (127477 bp)
Overview 1 RT 1: 47237-55893 bp Neighborhood of RT #1 [47237, 55910] EAL RVT-UG4 FimD FimC Feature: gene Location: 47237-48209 bp Feature: gene Location: 48413-49799 bp Feature: domain Description: EAL Location: 49058-49328 bp Feature: domain Description: EAL Location: 49058-493 28 bp Feature: gene Location: 50475-52505 bp Ori: OVY15351.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883-51327 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883 -513 27 bp Feature: gene Location: 52505-55099 bp Ori: OVY15352.1 Feature: domain Description: FimD Location: 52547-55088 bp Feature: domain Description: FimD Location: 52547-55088 bp Feature: gene Location: 55146-55910 bp Ori: OVY15280.1 Feature: domain Description: FimC Location: 55191-55893 bp Feature: domain Description: FimC Location: 55191-55893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)