myRT

myRT report for GCA_002187715.1_ASM218771v1

Download annotations/find similar RTs

Seq: NFYN01000054.1 Klebsiella pneumoniae strain AK_896 AK-896_NODE_58.ctg_1, whole genome shotgun sequence (19416 bp)
Overview 1 RT 1: 14072-17095 bp Neighborhood of RT #1 [14072, 17095] RVT-GII GIIM PHA02517 Feature: gene Location: 14072-14476 bp Feature: gene Location: 14391-14699 bp Feature: gene Location: 14785-16293 bp Ori: OVY09287.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15043-15775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5043-1 5775 bp Feature: domain Description: GIIM Note: maturase Location: 15850-16048 bp Feature: domain Description: GIIM Note: maturase Location: 1 5850-1 6048 bp Feature: gene Location: 16362-16844 bp Feature: domain Description: PHA02517 Location: 16380-16818 bp Feature: domain Description: PHA0251 7 Location: 1 6380-1 681 8 bp Feature: gene Location: 16910-17095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NFYN01000079.1 Klebsiella pneumoniae strain AK_896 AK-896_NODE_80.ctg_1, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OVY06176.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFYN01000007.1 Klebsiella pneumoniae strain AK_896 AK-896_NODE_15.ctg_1, whole genome shotgun sequence (127477 bp)
Overview 1 RT 1: 47237-55893 bp Neighborhood of RT #1 [47237, 55910] EAL RVT-UG4 FimD FimC Feature: gene Location: 47237-48209 bp Feature: gene Location: 48413-49799 bp Feature: domain Description: EAL Location: 49058-49328 bp Feature: domain Description: EAL Location: 49058-493 28 bp Feature: gene Location: 50475-52505 bp Ori: OVY20128.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883-51327 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883 -513 27 bp Feature: gene Location: 52505-55099 bp Ori: OVY20056.1 Feature: domain Description: FimD Location: 52547-55088 bp Feature: domain Description: FimD Location: 52547-55088 bp Feature: gene Location: 55146-55910 bp Ori: OVY20057.1 Feature: domain Description: FimC Location: 55191-55893 bp Feature: domain Description: FimC Location: 55191-55893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)