myRT

myRT report for GCA_002187745.1_ASM218774v1

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Seq: NFVQ01000001.1 Klebsiella pneumoniae strain PO380 PO380_NODE_1.ctg_1, whole genome shotgun sequence (458351 bp)
Overview 1 RT 1: 348766-355707 bp Neighborhood of RT #1 [348766, 356024] RVT-Retrons Phage_GPA PAPS_reductase Feature: gene Location: 348766-349590 bp Feature: gene Location: 350008-350250 bp Feature: gene Location: 350569-352308 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 350713-351334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35071 3-351 334 bp Feature: gene Location: 352789-355011 bp Feature: domain Description: Phage_GPA Location: 353323-354286 bp Feature: domain Description: Phage_GPA Location: 353323-354286 bp Feature: gene Location: 355008-356024 bp Feature: domain Description: PAPS_reductase Location: 355062-355707 bp Feature: domain Description: PAPS_reductase Location: 355062-355707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_GPA (pfam05840), PAPS_reductase (TIGR02057)

Seq: NFVQ01000044.1 Klebsiella pneumoniae strain PO380 PO380_NODE_49.ctg_1, whole genome shotgun sequence (4648 bp)
Overview 1 RT 1: 72-4648 bp Neighborhood of RT #1 [72, 4648] RVT-GII DUF4158 DDE_Tnp_Tn3 Feature: gene Location: 72-440 bp Feature: gene Location: 355-663 bp Feature: gene Location: 749-1891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1739 bp Feature: gene Location: 1916-4555 bp Feature: domain Description: DUF4158 Location: 1937-2066 bp Feature: domain Description: DUF4158 Location: 1937-2 066 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 3308-4475 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 3308-4475 bp Feature: gene Location: 4537-4648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), RVT-GII

Seq: NFVQ01000033.1 Klebsiella pneumoniae strain PO380 PO380_NODE_39.ctg_1, whole genome shotgun sequence (14050 bp)
Overview 1 RT 1: 5186-7974 bp Neighborhood of RT #1 [5186, 7988] RVT-GII PRK10276 Feature: gene Location: 5186-5416 bp Feature: gene Location: 5441-5632 bp Feature: gene Location: 5650-7158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6052-6766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6052-6766 bp Feature: gene Location: 7158-7409 bp Feature: gene Location: 7563-7988 bp Feature: domain Description: PRK10276 Location: 7566-7974 bp Feature: domain Description: PRK10276 Location: 7566-7974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)