myRT

myRT report for GCA_002187805.1_ASM218780v1

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Seq: NFWC01000009.1 Klebsiella pneumoniae strain PO1563 PO1563_NODE_17.ctg_1, whole genome shotgun sequence (97031 bp)
Overview 1 RT 1: 27302-32614 bp Neighborhood of RT #1 [27302, 32778] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 27302-28548 bp Feature: domain Description: PRK09692 Location: 27311-28205 bp Feature: domain Description: PRK09692 Location: 2731 1 -28205 bp Feature: gene Location: 28595-29191 bp Feature: gene Location: 29617-30582 bp Ori: OVU86164.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: gene Location: 30560-32152 bp Ori: OVU86165.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG3950 Location: 30740-31 961 bp Feature: gene Location: 32137-32778 bp Ori: OVU86166.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR02646 Location: 32239-3261 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: NFWC01000060.1 Klebsiella pneumoniae strain PO1563 PO1563_NODE_63.ctg_1, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 61-1915 bp Neighborhood of RT #1 [61, 1915] RVT-GII Feature: gene Location: 61-1545 bp Ori: OVU78071.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: gene Location: 1678-1915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFWC01000018.1 Klebsiella pneumoniae strain PO1563 PO1563_NODE_25.ctg_1, whole genome shotgun sequence (32740 bp)
Overview 1 RT 1: 19572-27288 bp Neighborhood of RT #1 [19572, 27299] XRE RVT-UG1 COG3440 COG3183 Feature: gene Location: 19572-20369 bp Ori: OVU83832.1 Feature: domain Description: XRE Location: 19575-19758 bp Feature: domain Description: XRE Location: 19575-19758 bp Feature: gene Location: 20668-21102 bp Feature: gene Location: 21111-24809 bp Ori: OVU83834.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 21723-22233 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 21723 -2223 3 bp Feature: gene Location: 25612-26481 bp Ori: OVU83835.1 Feature: domain Description: COG3440 Location: 25624-26473 bp Feature: domain Description: COG3 440 Location: 25624-26473 bp Feature: gene Location: 26661-27299 bp Ori: OVU83836.1 Feature: domain Description: COG3183 Location: 26979-27288 bp Feature: domain Description: COG3 183 Location: 26979-27288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), RVT-UG1, COG3440 (Predicted restriction endonuclease ), COG3183 (Predicted restriction endonuclease, HNH family )

Seq: NFWC01000023.1 Klebsiella pneumoniae strain PO1563 PO1563_NODE_3.ctg_1, whole genome shotgun sequence (376947 bp)
Overview 1 RT 1: 335039-339057 bp Neighborhood of RT #1 [335039, 339207] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 335039-336012 bp Feature: domain Description: PRK09692 Location: 335048-335411 bp Feature: domain Description: PRK09692 Location: 33504 8-3354 11 bp Feature: domain Description: PRK09692 Location: 335432-335804 bp Feature: domain Description: PRK09692 Location: 3354 32-335804 bp Feature: gene Location: 336065-336706 bp Ori: OVU83267.1 Feature: domain Description: SLATT_5 Location: 336068-336671 bp Feature: domain Description: SLATT_5 Location: 336068-336671 bp Feature: gene Location: 336901-338310 bp Ori: OVU83207.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 337138-337750 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 337138-337750 bp Feature: gene Location: 338492-338627 bp Feature: gene Location: 338637-339207 bp Feature: domain Description: Psu Location: 338676-339057 bp Feature: domain Description: Psu Location: 338676-339057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)