myRT

myRT report for GCA_002187995.1_ASM218799v1

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Seq: NFXG01000035.1 Klebsiella pneumoniae strain G4049 G4049_NODE_40.ctg_1, whole genome shotgun sequence (16994 bp)
Overview 1 RT 1: 4119-7142 bp Neighborhood of RT #1 [4119, 7142] PHA02517 RVT-GII GIIM Feature: gene Location: 4119-4304 bp Feature: gene Location: 4370-4852 bp Feature: domain Description: PHA02517 Location: 4388-4826 bp Feature: domain Description: PHA0251 7 Location: 4388-4826 bp Feature: gene Location: 4921-6429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5179-5911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 79-591 1 bp Feature: domain Description: GIIM Note: maturase Location: 5986-6184 bp Feature: domain Description: GIIM Note: maturase Location: 5986-61 84 bp Feature: gene Location: 6515-6823 bp Feature: gene Location: 6738-7142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NFXG01000052.1 Klebsiella pneumoniae strain G4049 G4049_NODE_56.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFXG01000079.1 Klebsiella pneumoniae strain G4049 G4049_NODE_9.ctg_1, whole genome shotgun sequence (202117 bp)
Overview 1 RT 1: 19710-26048 bp Neighborhood of RT #1 [19710, 26048] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 19710-19961 bp Feature: gene Location: 19958-20827 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 20480-20651 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 20480-20651 bp Feature: gene Location: 21483-22583 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21666-22194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21666-22194 bp Feature: gene Location: 22698-24944 bp Feature: domain Description: AAA_15 Location: 22701-23709 bp Feature: domain Description: AAA_15 Location: 22701-23 709 bp Feature: gene Location: 25857-26048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)