myRT

myRT report for GCA_002188095.1_ASM218809v1

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Seq: NFXR01000019.1 Klebsiella pneumoniae strain G160 G160_NODE_26.ctg_1, whole genome shotgun sequence (78047 bp)
Overview 1 RT 1: 49482-52270 bp Neighborhood of RT #1 [49482, 52284] RVT-GII PRK10276 Feature: gene Location: 49482-49712 bp Feature: gene Location: 49737-49928 bp Feature: gene Location: 49946-51454 bp Ori: OVW98458.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50348-51062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50348-51 062 bp Feature: gene Location: 51454-51705 bp Feature: gene Location: 51859-52284 bp Ori: OVW98460.1 Feature: domain Description: PRK10276 Location: 51862-52270 bp Feature: domain Description: PRK1 0276 Location: 51 862-52270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NFXR01000015.1 Klebsiella pneumoniae strain G160 G160_NODE_22.ctg_1, whole genome shotgun sequence (93287 bp)
Overview 1 RT 1: 45502-52487 bp Neighborhood of RT #1 [45502, 52504] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45502-46344 bp Feature: domain Description: INT_P4_C Location: 45703-46282 bp Feature: domain Description: INT_P4_C Location: 45703-462 82 bp Feature: gene Location: 46571-47024 bp Feature: domain Description: Integrase_1 Location: 46589-46853 bp Feature: domain Description: Integrase_1 Location: 46589-46853 bp Feature: gene Location: 47021-49102 bp Ori: OVW99298.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47432-47876 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47432 -47876 bp Feature: gene Location: 49099-51693 bp Ori: OVW99299.1 Feature: domain Description: FimD Location: 49141-51682 bp Feature: domain Description: FimD Location: 49141-51682 bp Feature: gene Location: 51740-52504 bp Ori: OVW99300.1 Feature: domain Description: FimC Location: 51785-52487 bp Feature: domain Description: FimC Location: 51785-52 487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)