myRT

myRT report for GCA_002188235.1_ASM218823v1

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Seq: NFYH01000010.1 Klebsiella pneumoniae strain BH2308 BH2308_NODE_16.ctg_1, whole genome shotgun sequence (127477 bp)
Overview 1 RT 1: 47237-55893 bp Neighborhood of RT #1 [47237, 55910] EAL RVT-UG4 FimD FimC Feature: gene Location: 47237-48209 bp Feature: gene Location: 48413-49799 bp Feature: domain Description: EAL Location: 49058-49328 bp Feature: domain Description: EAL Location: 49058-49328 bp Feature: gene Location: 50475-52505 bp Ori: OVX89997.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883-51327 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50883-51 327 bp Feature: gene Location: 52505-55099 bp Ori: OVX89925.1 Feature: domain Description: FimD Location: 52547-55088 bp Feature: domain Description: FimD Location: 52547-55088 bp Feature: gene Location: 55146-55910 bp Ori: OVX89926.1 Feature: domain Description: FimC Location: 55191-55893 bp Feature: domain Description: FimC Location: 551 91 -55893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NFYH01000052.1 Klebsiella pneumoniae strain BH2308 BH2308_NODE_54.ctg_1, whole genome shotgun sequence (21211 bp)
Overview 1 RT 1: 4119-7142 bp Neighborhood of RT #1 [4119, 7142] PHA02517 RVT-GII GIIM Feature: gene Location: 4119-4304 bp Feature: gene Location: 4370-4852 bp Feature: domain Description: PHA02517 Location: 4388-4826 bp Feature: domain Description: PHA02 517 Location: 4388-482 6 bp Feature: gene Location: 4921-6429 bp Ori: OVX79082.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5179-5911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5179-5911 bp Feature: domain Description: GIIM Note: maturase Location: 5986-6184 bp Feature: domain Description: GIIM Note: maturase Location: 5986-6184 bp Feature: gene Location: 6515-6823 bp Feature: gene Location: 6738-7142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NFYH01000078.1 Klebsiella pneumoniae strain BH2308 BH2308_NODE_78.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OVX77080.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII