myRT

myRT report for GCA_002188245.1_ASM218824v1

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Seq: NFYK01000086.1 Klebsiella pneumoniae strain AK_B_SD_011 AK-B-SD-011_NODE_5.ctg_1, whole genome shotgun sequence (295609 bp)
Overview 1 RT 1: 137957-140988 bp Neighborhood of RT #1 [137957, 140990] RVT-Retrons HTH_XRE DinI Feature: gene Location: 137957-138151 bp Feature: gene Location: 138150-138581 bp Feature: gene Location: 138720-139670 bp Ori: OVX95306.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 138900-139443 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 38900-1 39443 bp Feature: gene Location: 139648-139956 bp Ori: OVX95307.1 Feature: domain Description: HTH_XRE Location: 139660-139825 bp Feature: domain Description: HTH_XRE Location: 1 39660-1 39825 bp Feature: gene Location: 140577-140990 bp Ori: OVX95469.1 Feature: domain Description: DinI Location: 140805-140988 bp Feature: domain Description: DinI Location: 1 40805-1 40988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), DinI (pfam06183)

Seq: NFYK01000126.1 Klebsiella pneumoniae strain AK_B_SD_011 AK-B-SD-011_NODE_86.ctg_1, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1796 bp Neighborhood of RT #1 [61, 1796] RVT-GII Feature: gene Location: 61-1545 bp Ori: OVX91206.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: gene Location: 1545-1796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFYK01000130.1 Klebsiella pneumoniae strain AK_B_SD_011 AK-B-SD-011_NODE_9.ctg_1, whole genome shotgun sequence (205589 bp)
Overview 1 RT 1: 7941-13245 bp Neighborhood of RT #1 [7941, 13247] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 7941-8360 bp Ori: OVX90830.1 Feature: domain Description: PRK10276 Location: 7944-8355 bp Feature: domain Description: PRK10276 Location: 7944-83 55 bp Feature: gene Location: 8362-9627 bp Ori: OVX90831.1 Feature: domain Description: umuC Location: 8365-9625 bp Feature: domain Description: umuC Location: 83 65-9625 bp Feature: gene Location: 10579-11208 bp Ori: OVX91001.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 10582-11029 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 10582-11029 bp Feature: gene Location: 11409-12077 bp Ori: OVX90832.1 Feature: domain Description: PRK09951 Location: 11412-12075 bp Feature: domain Description: PRK09951 Location: 11412-12075 bp Feature: gene Location: 12282-13247 bp Ori: OVX90833.1 Feature: domain Description: PRK15110 Location: 12285-13245 bp Feature: domain Description: PRK15110 Location: 12285-13 245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NFYK01000117.1 Klebsiella pneumoniae strain AK_B_SD_011 AK-B-SD-011_NODE_78.ctg_1, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 278-586 bp Feature: gene Location: 672-2180 bp Ori: OVX92180.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)