myRT

myRT report for GCA_002189165.1_ASM218916v1

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Seq: MSYU01000059.1 Klebsiella pneumoniae strain C3-D9-12 NA-C3_S125_R1__paired__contig_59, whole genome shotgun sequence (1762 bp)
Overview 1 RT 1: 1-1661 bp Neighborhood of RT #1 [1, 1661] RVT-GII Feature: gene Location: 1-1410 bp Ori: OWA56898.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1 093 bp Feature: gene Location: 1410-1661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MSYU01000019.1 Klebsiella pneumoniae strain C3-D9-12 NA-C3_S125_R1__paired__contig_19, whole genome shotgun sequence (125772 bp)
Overview 1 RT 1: 31426-38807 bp Neighborhood of RT #1 [31426, 38824] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31426-32664 bp Feature: domain Description: PRK09692 Location: 31432-32614 bp Feature: domain Description: PRK09692 Location: 31432 -32 614 bp Feature: gene Location: 32844-33299 bp Ori: OWA61341.1 Feature: domain Description: Integrase_1 Location: 32847-33081 bp Feature: domain Description: Integrase_1 Location: 32 847-33081 bp Feature: gene Location: 33341-35422 bp Ori: OWA61342.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33752-34196 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33752 -34196 bp Feature: gene Location: 35419-38013 bp Ori: OWA61343.1 Feature: domain Description: FimD Location: 35461-38002 bp Feature: domain Description: FimD Location: 35461-38002 bp Feature: gene Location: 38060-38824 bp Ori: OWA61344.1 Feature: domain Description: FimC Location: 38105-38807 bp Feature: domain Description: FimC Location: 38105-38807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)