myRT

myRT report for GCA_002189255.1_ASM218925v1

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Seq: MSZC01000132.1 Klebsiella pneumoniae strain C11-E7-15 NA-C11_S129_R1__paired__contig_134, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 1-1894 bp Neighborhood of RT #1 [1, 1894] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OWA98070.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Feature: gene Location: 1827-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MSZC01000019.1 Klebsiella pneumoniae strain C11-E7-15 NA-C11_S129_R1__paired__contig_19, whole genome shotgun sequence (42906 bp)
Overview 1 RT 1: 25505-29761 bp Neighborhood of RT #1 [25505, 29775] PRK10724 SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25505-25981 bp Ori: OWB05447.1 Feature: domain Description: PRK10724 Location: 25511-25976 bp Feature: domain Description: PRK1072 4 Location: 2 5511-2 5976 bp Feature: gene Location: 26092-26574 bp Ori: OWB05448.1 Feature: domain Description: SmpB Location: 26122-26566 bp Feature: domain Description: SmpB Location: 2 612 2 -2 6566 bp Feature: gene Location: 27189-27962 bp Ori: OWB05449.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27324-27777 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 732 4-2 7777 bp Feature: gene Location: 28366-28581 bp Ori: OWB05467.1 Feature: domain Description: PRK09678 Location: 28372-28564 bp Feature: domain Description: PRK09678 Location: 2 8372 -2 8564 bp Feature: gene Location: 28675-29775 bp Ori: OWB05450.1 Feature: domain Description: D Location: 28690-29761 bp Feature: domain Description: D Location: 2 8690-2 9761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)

Seq: MSZC01000049.1 Klebsiella pneumoniae strain C11-E7-15 NA-C11_S129_R1__paired__contig_49, whole genome shotgun sequence (10283 bp)
Overview 1 RT 1: 6147-8952 bp Neighborhood of RT #1 [6147, 8952] RVT-GII GIIM PHA02517 Feature: gene Location: 6147-6515 bp Feature: gene Location: 6430-6855 bp Feature: gene Location: 6824-8332 bp Ori: OWB02051.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7082-7814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7082-7814 bp Feature: domain Description: GIIM Note: maturase Location: 7889-8087 bp Feature: domain Description: GIIM Note: maturase Location: 7889-8087 bp Feature: gene Location: 8407-8655 bp Ori: OWB02047.1 Feature: domain Description: PHA02517 Location: 8416-8620 bp Feature: domain Description: PHA02517 Location: 8416-8620 bp Feature: gene Location: 8752-8952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)