myRT

myRT report for GCA_002189265.1_ASM218926v1

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Seq: MSYX01000099.1 Klebsiella pneumoniae strain C6-E2-14 NA-C6_S126_R1__paired__contig_99, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 1-1795 bp Neighborhood of RT #1 [1, 1795] RVT-GII Feature: gene Location: 1-67 bp Feature: gene Location: 60-1544 bp Ori: OWA73362.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1 1 52 bp Feature: gene Location: 1544-1795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MSYX01000088.1 Klebsiella pneumoniae strain C6-E2-14 NA-C6_S126_R1__paired__contig_88, whole genome shotgun sequence (32430 bp)
Overview 1 RT 1: 5950-8755 bp Neighborhood of RT #1 [5950, 8755] RVT-GII GIIM PHA02517 Feature: gene Location: 5950-6318 bp Feature: gene Location: 6233-6658 bp Feature: gene Location: 6627-8135 bp Ori: OWA73767.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6885-7617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6885-7617 bp Feature: domain Description: GIIM Note: maturase Location: 7692-7890 bp Feature: domain Description: GIIM Note: maturase Location: 7692 -7890 bp Feature: gene Location: 8210-8458 bp Ori: OWA73749.1 Feature: domain Description: PHA02517 Location: 8219-8423 bp Feature: domain Description: PHA02 517 Location: 82 19-842 3 bp Feature: gene Location: 8555-8755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: MSYX01000054.1 Klebsiella pneumoniae strain C6-E2-14 NA-C6_S126_R1__paired__contig_54, whole genome shotgun sequence (41974 bp)
Overview 1 RT 1: 25505-29761 bp Neighborhood of RT #1 [25505, 29775] PRK10724 SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25505-25981 bp Ori: OWA75702.1 Feature: domain Description: PRK10724 Location: 25511-25976 bp Feature: domain Description: PRK10724 Location: 25511-25976 bp Feature: gene Location: 26092-26574 bp Ori: OWA75703.1 Feature: domain Description: SmpB Location: 26122-26566 bp Feature: domain Description: SmpB Location: 26122-26566 bp Feature: gene Location: 27189-27962 bp Ori: OWA75704.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27324-27777 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 273 24-27777 bp Feature: gene Location: 28366-28581 bp Ori: OWA75721.1 Feature: domain Description: PRK09678 Location: 28372-28564 bp Feature: domain Description: PRK09678 Location: 283 72-28564 bp Feature: gene Location: 28675-29775 bp Ori: OWA75705.1 Feature: domain Description: D Location: 28690-29761 bp Feature: domain Description: D Location: 28690-29761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)

Seq: MSYX01000251.1 Klebsiella pneumoniae strain C6-E2-14 NA-C6_S126_R1__paired__contig_253, whole genome shotgun sequence (1560 bp)
Overview 1 RT 1: 1-1557 bp Neighborhood of RT #1 [1, 1560] RVT-Retrons Feature: gene Location: 1-839 bp Feature: gene Location: 954-1560 bp Ori: OWA67658.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1134-1557 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1134 -1557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons