myRT

myRT report for GCA_002189345.1_ASM218934v1

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Seq: MSYZ01000077.1 Klebsiella pneumoniae strain C8-E4-15 NA-C8_S91_R1__paired__contig_77, whole genome shotgun sequence (7323 bp)
Overview 1 RT 1: 1540-4838 bp Neighborhood of RT #1 [1540, 4838] Tra5 PHA02517 RVT-GII GIIM Feature: gene Location: 1540-2076 bp Feature: domain Description: Tra5 Location: 1645-2068 bp Feature: domain Description: Tra5 Location: 1 645-2068 bp Feature: gene Location: 2102-2578 bp Ori: OWA84685.1 Feature: domain Description: PHA02517 Location: 2111-2573 bp Feature: domain Description: PHA0251 7 Location: 21 1 1 -2573 bp Feature: gene Location: 2653-4161 bp Ori: OWA84690.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2911-3643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 1 -3643 bp Feature: domain Description: GIIM Note: maturase Location: 3718-3916 bp Feature: domain Description: GIIM Note: maturase Location: 371 8-391 6 bp Feature: gene Location: 4130-4555 bp Feature: gene Location: 4470-4838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: MSYZ01000062.1 Klebsiella pneumoniae strain C8-E4-15 NA-C8_S91_R1__paired__contig_62, whole genome shotgun sequence (87510 bp)
Overview 1 RT 1: 79670-87018 bp Neighborhood of RT #1 [79670, 87068] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 79670-80434 bp Ori: OWA84996.1 Feature: domain Description: FimC Location: 79715-80417 bp Feature: domain Description: FimC Location: 79715-80417 bp Feature: gene Location: 80481-83075 bp Ori: OWA84997.1 Feature: domain Description: FimD Location: 80523-83064 bp Feature: domain Description: FimD Location: 8052 3-83064 bp Feature: gene Location: 83072-85153 bp Ori: OWA84998.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 83483-83927 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 83483-8392 7 bp Feature: gene Location: 85195-85650 bp Ori: OWA84999.1 Feature: domain Description: Integrase_1 Location: 85198-85432 bp Feature: domain Description: Integrase_1 Location: 85198-85432 bp Feature: gene Location: 85830-87068 bp Feature: domain Description: PRK09692 Location: 85836-87018 bp Feature: domain Description: PRK09692 Location: 85836-87018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: MSYZ01000072.1 Klebsiella pneumoniae strain C8-E4-15 NA-C8_S91_R1__paired__contig_72, whole genome shotgun sequence (22056 bp)
Overview 1 RT 1: 4592-7408 bp Neighborhood of RT #1 [4592, 7408] RVT-GII Feature: gene Location: 4592-4707 bp Feature: gene Location: 4772-5023 bp Feature: gene Location: 5023-6507 bp Ori: OWA84750.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5425-6115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5425-6115 bp Feature: gene Location: 6500-6568 bp Feature: gene Location: 6977-7408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MSYZ01000090.1 Klebsiella pneumoniae strain C8-E4-15 NA-C8_S91_R1__paired__contig_90, whole genome shotgun sequence (9673 bp)
Overview 1 RT 1: 4747-7941 bp Neighborhood of RT #1 [4747, 7955] RVT-GII PRK10276 Feature: gene Location: 4747-4959 bp Feature: gene Location: 5129-5359 bp Feature: gene Location: 5593-7125 bp Ori: OWA84583.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5995-6733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5995-6733 bp Feature: gene Location: 7125-7376 bp Feature: gene Location: 7530-7955 bp Ori: OWA84585.1 Feature: domain Description: PRK10276 Location: 7533-7941 bp Feature: domain Description: PRK10276 Location: 7533-794 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)