myRT

myRT report for GCA_002189475.1_ASM218947v1

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Seq: MZNW01000107.1 Comamonas thiooxydans strain QT12 contig0107, whole genome shotgun sequence (7282 bp)
Overview 1 RT 1: 4996-6907 bp Neighborhood of RT #1 [4996, 7140] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 4996-5397 bp Feature: domain Description: DUF1566 Location: 5164-5374 bp Feature: domain Description: DUF1 566 Location: 51 64-5374 bp Feature: gene Location: 5425-5886 bp Feature: domain Description: Avd_like Location: 5452-5758 bp Feature: domain Description: Avd_like Location: 5452-5758 bp Feature: gene Location: 6040-7140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6229-6907 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6229-6907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: MZNW01000307.1 Comamonas thiooxydans strain QT12 contig0307, whole genome shotgun sequence (5411 bp)
Overview 1 RT 1: 437-3419 bp Neighborhood of RT #1 [437, 3583] RVT-GII GIIM KfrA_N KfrB Feature: gene Location: 437-1840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1418 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1688 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1688 bp Feature: gene Location: 2033-3064 bp Feature: domain Description: KfrA_N Location: 2048-2390 bp Feature: domain Description: KfrA_N Location: 2 048-2 390 bp Feature: gene Location: 3236-3583 bp Feature: domain Description: KfrB Location: 3242-3419 bp Feature: domain Description: KfrB Location: 32 42 -3419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KfrA_N (pfam11740), KfrB (pfam18790), RVT-GII, GIIM (pfam08388)

Seq: MZNW01000571.1 Comamonas thiooxydans strain QT12 contig0571, whole genome shotgun sequence (12559 bp)
Overview 1 RT 1: 7958-12508 bp Neighborhood of RT #1 [7958, 12540] PRK05579 RVT_N RVT-GII GIIM HNH Feature: gene Location: 7958-8476 bp Feature: gene Location: 8500-9726 bp Feature: domain Description: PRK05579 Location: 8515-9709 bp Feature: domain Description: PRK05579 Location: 8515-9709 bp Feature: gene Location: 10846-12540 bp Feature: RT Description: RVT_N Location: 10903-11143 bp Feature: RT Description: RVT_N Location: 10903 -11143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11194-11842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11194-11842 bp Feature: domain Description: GIIM Note: maturase Location: 11896-12127 bp Feature: domain Description: GIIM Note: maturase Location: 11896-12127 bp Feature: domain Description: HNH Note: nucleases Location: 12373-12508 bp Feature: domain Description: HNH Note: nucleases Location: 123 73 -12508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated)