myRT

myRT report for GCA_002190705.1_ASM219070v1

Download annotations/find similar RTs

Seq: LYAG01000540.1 Escherichia coli strain ECOR30 ECOR30_contig_183, whole genome shotgun sequence (2375 bp)
Overview 1 RT 1: 103-2291 bp Neighborhood of RT #1 [103, 2291] RVT-GII GIIM Feature: gene Location: 103-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1 1 08 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 83-1 381 bp Feature: gene Location: 1920-2291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LYAG01001093.1 Escherichia coli strain ECOR30 ECOR30_contig_7, whole genome shotgun sequence (433346 bp)
Overview 1 RT 1: 266721-274023 bp Neighborhood of RT #1 [266721, 274037] DUF5405 Phage_GPA RVT-AbiP2 Q P Feature: gene Location: 266721-266996 bp Feature: domain Description: DUF5405 Location: 266739-266979 bp Feature: domain Description: DUF5405 Location: 2 66739-2 66979 bp Feature: gene Location: 266986-269271 bp Feature: domain Description: Phage_GPA Location: 267385-268372 bp Feature: domain Description: Phage_GPA Location: 2 67385-2 68372 bp Feature: gene Location: 269375-271087 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 269957-270410 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 69957-2 70410 bp Feature: gene Location: 271231-272265 bp Feature: domain Description: Q Location: 271234-272257 bp Feature: domain Description: Q Location: 2 712 34-2 72 2 57 bp Feature: gene Location: 272265-274037 bp Feature: domain Description: P Location: 272292-274023 bp Feature: domain Description: P Location: 2 72 2 92 -2 7402 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-AbiP2, Q (PHA02536), P (PHA02535)