myRT

myRT report for GCA_002190875.1_ASM219087v1

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Seq: LYCJ01000933.1 Escherichia coli strain ECOR39 ECOR39_contig_80_consensus, whole genome shotgun sequence (2452 bp)
Overview 1 RT 1: 195-2383 bp Neighborhood of RT #1 [195, 2383] RVT-GII GIIM Feature: gene Location: 195-1703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1 1 85 bp Feature: domain Description: GIIM Note: maturase Location: 1260-1458 bp Feature: domain Description: GIIM Note: maturase Location: 1 260-1 458 bp Feature: gene Location: 1672-2097 bp Feature: gene Location: 2012-2383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LYCJ01000265.1 Escherichia coli strain ECOR39 ECOR39_contig_17_consensus, whole genome shotgun sequence (68149 bp)
Overview 1 RT 1: 30261-34143 bp Neighborhood of RT #1 [30261, 34148] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 30261-30977 bp Feature: domain Description: rph Location: 30264-30972 bp Feature: domain Description: rph Location: 302 64-30972 bp Feature: gene Location: 31043-31684 bp Feature: domain Description: pyrE Location: 31046-31679 bp Feature: domain Description: pyrE Location: 31046-31679 bp Feature: gene Location: 31982-32941 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32117-32666 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 117-32 666 bp Feature: gene Location: 32987-33583 bp Feature: domain Description: slmA Location: 32993-33569 bp Feature: domain Description: slmA Location: 32 993-33569 bp Feature: gene Location: 33690-34148 bp Feature: domain Description: dut Location: 33696-34143 bp Feature: domain Description: dut Location: 33696-34143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)