myRT

myRT report for GCA_002190885.1_ASM219088v1

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Seq: LYCH01000013.1 Escherichia coli strain ECOR41 ECOR41_contig_111_consensus, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 96-2284 bp Neighborhood of RT #1 [96, 2284] RVT-GII GIIM Feature: gene Location: 96-1604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-1086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-1 086 bp Feature: domain Description: GIIM Note: maturase Location: 1161-1359 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 61 -1 359 bp Feature: gene Location: 1573-1998 bp Feature: gene Location: 1913-2284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LYCH01000375.1 Escherichia coli strain ECOR41 ECOR41_contig_44_consensus, whole genome shotgun sequence (41353 bp)
Overview 1 RT 1: 36283-40165 bp Neighborhood of RT #1 [36283, 40170] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 36283-36741 bp Feature: domain Description: dut Location: 36289-36736 bp Feature: domain Description: dut Location: 362 89-36736 bp Feature: gene Location: 36848-37444 bp Feature: domain Description: slmA Location: 36854-37430 bp Feature: domain Description: slmA Location: 36854-37430 bp Feature: gene Location: 37490-38449 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37625-38174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3762 5-38174 bp Feature: gene Location: 38747-39388 bp Feature: domain Description: pyrE Location: 38750-39383 bp Feature: domain Description: pyrE Location: 38750-39383 bp Feature: gene Location: 39454-40170 bp Feature: domain Description: rph Location: 39457-40165 bp Feature: domain Description: rph Location: 39457-40165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)