myRT

myRT report for GCA_002190975.1_ASM219097v1

Download annotations/find similar RTs

Seq: LYBZ01000401.1 Escherichia coli strain ECOR49 ECOR49_contig_78_consensus, whole genome shotgun sequence (24151 bp)
Overview 1 RT 1: 4611-9955 bp Neighborhood of RT #1 [4611, 9955] YesN YesN YesM RVT-GII GIIM group_II_RT_mat Feature: gene Location: 4611-5666 bp Ori: OWD82550.1 Feature: domain Description: YesN Location: 4614-5013 bp Feature: domain Description: YesN Location: 461 4-501 3 bp Feature: domain Description: YesN Location: 5346-5643 bp Feature: domain Description: YesN Location: 5346-5643 bp Feature: gene Location: 5683-6912 bp Ori: OWD82551.1 Feature: domain Description: YesM Location: 6163-6904 bp Feature: domain Description: YesM Location: 61 63-6904 bp Feature: gene Location: 7495-8016 bp Ori: OWD82552.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7501-7783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7501 -7783 bp Feature: domain Description: GIIM Note: maturase Location: 7831-8011 bp Feature: domain Description: GIIM Note: maturase Location: 7831 -801 1 bp Feature: gene Location: 8044-8564 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8206-8371 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8206-8371 bp Feature: gene Location: 9050-9955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: LYBZ01000066.1 Escherichia coli strain ECOR49 ECOR49_contig_15_consensus, whole genome shotgun sequence (152860 bp)
Overview 1 RT 1: 109167-115276 bp Neighborhood of RT #1 [109167, 115335] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 109167-110087 bp Ori: OWD92575.1 Feature: domain Description: AbiEii Location: 109209-109950 bp Feature: domain Description: AbiEii Location: 1092 09-109950 bp Feature: gene Location: 110074-110856 bp Ori: OWD92576.1 Feature: domain Description: AbiEi_3_N Location: 110086-110347 bp Feature: domain Description: AbiEi_3_N Location: 110086-110347 bp Feature: domain Description: AbiEi_3 Location: 110359-110815 bp Feature: domain Description: AbiEi_3 Location: 110359-110815 bp Feature: gene Location: 111172-114381 bp Ori: OWD92577.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 111700-112189 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 111700-112 189 bp Feature: domain Description: nitrilase Location: 113695-114292 bp Feature: domain Description: nitrilase Location: 113695-1142 92 bp Feature: gene Location: 114728-115198 bp Feature: gene Location: 115195-115335 bp Ori: OWD92579.1 Feature: domain Description: SfsB Location: 115204-115276 bp Feature: domain Description: SfsB Location: 1152 04-1152 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)