myRT

myRT report for GCA_002191035.1_ASM219103v1

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Seq: LYBY01000299.1 Escherichia coli strain ECOR50 ECOR50_contig_36_consensus, whole genome shotgun sequence (24688 bp)
Overview 1 RT 1: 4020-10411 bp Neighborhood of RT #1 [4020, 10437] YesN YesN YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 4020-5075 bp Ori: OWD80322.1 Feature: domain Description: YesN Location: 4023-4422 bp Feature: domain Description: YesN Location: 4023-4422 bp Feature: domain Description: YesN Location: 4755-5052 bp Feature: domain Description: YesN Location: 4755-5052 bp Feature: gene Location: 5092-6321 bp Ori: OWD80323.1 Feature: domain Description: YesM Location: 5572-6313 bp Feature: domain Description: YesM Location: 5572-631 3 bp Feature: gene Location: 6904-7425 bp Ori: OWD80324.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6910-7192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691 0-71 92 bp Feature: domain Description: GIIM Note: maturase Location: 7240-7420 bp Feature: domain Description: GIIM Note: maturase Location: 7240-7420 bp Feature: gene Location: 7453-7992 bp Ori: OWD80325.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7783-7861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7783-7861 bp Feature: gene Location: 8478-9383 bp Feature: gene Location: 9520-10437 bp Ori: OWD80327.1 Feature: domain Description: PFLE_PFLC Location: 9556-10411 bp Feature: domain Description: PFLE_PFLC Location: 9556-1 041 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: LYBY01000459.1 Escherichia coli strain ECOR50 ECOR50_contig_66_consensus, whole genome shotgun sequence (128984 bp)
Overview 1 RT 1: 102865-108974 bp Neighborhood of RT #1 [102865, 109033] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 102865-103785 bp Ori: OWD76911.1 Feature: domain Description: AbiEii Location: 102907-103648 bp Feature: domain Description: AbiEii Location: 102 907-103648 bp Feature: gene Location: 103772-104554 bp Ori: OWD76912.1 Feature: domain Description: AbiEi_3_N Location: 103784-104045 bp Feature: domain Description: AbiEi_3_N Location: 103784-104045 bp Feature: domain Description: AbiEi_3 Location: 104057-104513 bp Feature: domain Description: AbiEi_3 Location: 104057-104513 bp Feature: gene Location: 104870-108079 bp Ori: OWD76913.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105398-105887 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105398-105887 bp Feature: domain Description: nitrilase Location: 107393-107990 bp Feature: domain Description: nitrilase Location: 107393-107990 bp Feature: gene Location: 108426-108896 bp Feature: gene Location: 108893-109033 bp Ori: OWD76915.1 Feature: domain Description: SfsB Location: 108902-108974 bp Feature: domain Description: SfsB Location: 108902 -108974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)