myRT

myRT report for GCA_002191055.1_ASM219105v1

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Seq: LYCI01000612.1 Escherichia coli strain ECOR40 ECOR40_contig_251_consensus, whole genome shotgun sequence (2362 bp)
Overview 1 RT 1: 125-2313 bp Neighborhood of RT #1 [125, 2313] RVT-GII GIIM Feature: gene Location: 125-1633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1 1 1 5 bp Feature: domain Description: GIIM Note: maturase Location: 1190-1388 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 90-1 388 bp Feature: gene Location: 1602-2027 bp Feature: gene Location: 1942-2313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LYCI01000599.1 Escherichia coli strain ECOR40 ECOR40_contig_23_consensus, whole genome shotgun sequence (147134 bp)
Overview 1 RT 1: 30260-34142 bp Neighborhood of RT #1 [30260, 34147] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 30260-30976 bp Feature: domain Description: rph Location: 30263-30971 bp Feature: domain Description: rph Location: 302 63-30971 bp Feature: gene Location: 31042-31683 bp Feature: domain Description: pyrE Location: 31045-31678 bp Feature: domain Description: pyrE Location: 31045-31678 bp Feature: gene Location: 31981-32940 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32116-32665 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 116-32 665 bp Feature: gene Location: 32986-33582 bp Feature: domain Description: slmA Location: 32992-33568 bp Feature: domain Description: slmA Location: 32 992 -33568 bp Feature: gene Location: 33689-34147 bp Feature: domain Description: dut Location: 33695-34142 bp Feature: domain Description: dut Location: 33695-34142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)