myRT

myRT report for GCA_002193195.1_ASM219319v1

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Seq: NHPS01000001.1 Escherichia coli strain 6297 6297_NODE_1_length_997204_cov_83.8323_ID_2663, whole genome shotgun sequence (997204 bp)
Overview 1 RT 1: 37289-43289 bp Neighborhood of RT #1 [37289, 43435] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 37289-37398 bp Feature: domain Description: SfsB Location: 37298-37364 bp Feature: domain Description: SfsB Location: 37298-37364 bp Feature: gene Location: 37395-37865 bp Feature: gene Location: 38212-41421 bp Ori: OWG46637.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 38740-39229 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 38740-39229 bp Feature: domain Description: nitrilase Location: 40735-41332 bp Feature: domain Description: nitrilase Location: 40735-41 332 bp Feature: gene Location: 41716-42519 bp Ori: OWG46638.1 Feature: domain Description: AbiEi_3_N Location: 41749-42010 bp Feature: domain Description: AbiEi_3_N Location: 41 749-4201 0 bp Feature: domain Description: AbiEi_3 Location: 42025-42478 bp Feature: domain Description: AbiEi_3 Location: 42025-42478 bp Feature: gene Location: 42506-43435 bp Ori: OWG46639.1 Feature: domain Description: AbiEii Location: 42548-43289 bp Feature: domain Description: AbiEii Location: 42548-43289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NHPS01000005.1 Escherichia coli strain 6297 6297_NODE_5_length_523467_cov_86.5327_ID_2671, whole genome shotgun sequence (523467 bp)
Overview 1 RT 1: 152374-156253 bp Neighborhood of RT #1 [152374, 156258] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 152374-153090 bp Ori: OWG43397.1 Feature: domain Description: rph Location: 152377-153085 bp Feature: domain Description: rph Location: 152 377-153085 bp Feature: gene Location: 153156-153797 bp Ori: OWG43398.1 Feature: domain Description: pyrE Location: 153159-153792 bp Feature: domain Description: pyrE Location: 153159-153792 bp Feature: gene Location: 154095-155054 bp Ori: OWG43399.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154230-154779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1542 30-154779 bp Feature: gene Location: 155100-155696 bp Ori: OWG43400.1 Feature: domain Description: slmA Location: 155106-155682 bp Feature: domain Description: slmA Location: 155106-155682 bp Feature: gene Location: 155803-156258 bp Ori: OWG43749.1 Feature: domain Description: dut Location: 155806-156253 bp Feature: domain Description: dut Location: 155806-1562 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)